Basic Information:

  VIRBase ID:  

VHID00141398

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          PROM2:  NM_001165977     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	PROM2
miRBase Accession/Entrez ID	MIMAT0015279	150696
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PROML2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PROM2	chr2:95956779(+) A-I      3'UTR chr2:95956696(+) A-I      3'UTR chr2:95956619(+) A-I      3'UTR chr2:95956676(+) A-I      3'UTR chr2:95956735(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	PROM2	chr2:95940208(+) A-I exon 5'UTR    15342557 chr2:95947085(+) A-I exon CDS    15342557 chr2:95956619(+) A-I exon 3'UTR    15342557   //15258596 chr2:95956676(+) A-I exon 3'UTR    15342557   //15258596 chr2:95956735(+) A-I exon 3'UTR    15342557   //15258596 chr2:95956770(+) A-I exon 3'UTR    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PROM2	chr2:95944267-95944268(+) m1A exon//intron       26863196

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PROM2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: PROM2

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg