Basic Information:

  VIRBase ID:  

VHID00138547

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H3-5p:  MIMAT0015279          ADD2:  NM_001617     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H3-5p	ADD2
miRBase Accession/Entrez ID	MIMAT0015279	119
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ADDB

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ADD2	chr2:70930158(-) A-I      intronic chr2:70991911(-) A-I      intronic chr2:70929475(-) A-I      intronic chr2:70924215(-) A-I      intronic chr2:70929437(-) A-I      intronic chr2:70929445(-) A-I      intronic chr2:70929427(-) A-I      intronic chr2:70929436(-) A-I      intronic chr2:70929478(-) A-I      intronic chr2:70909082(-) A-I      intronic chr2:70930041(-) A-I      intronic chr2:70930171(-) A-I      intronic chr2:70930002(-) A-I      intronic chr2:70930111(-) A-I      intronic chr2:70989043(-) A-I      intronic chr2:70930189(-) A-I      intronic chr2:70984233(-) A-I      intronic chr2:70929420(-) A-I      intronic chr2:70930221(-) A-I      intronic chr2:70991148(-) A-I      intronic chr2:70929588(-) A-I      intronic chr2:70930067(-) A-I      intronic chr2:70929371(-) A-I      intronic chr2:70985925(-) A-I      intronic chr2:70929476(-) A-I      intronic chr2:70929587(-) A-I      intronic chr2:70989060(-) A-I      intronic chr2:70930008(-) A-I      intronic chr2:70984232(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ADD2	chr2:70887929-70887930(-) m6A 3'UTR//intron       24981863 chr2:70887964-70887965(-) m6A 3'UTR//intron       24981863 chr2:70888026-70888027(-) m6A 3'UTR//intron       24981863 chr2:70888038-70888039(-) m6A 3'UTR//intron       24981863 chr2:70889554-70889555(-) m6A 3'UTR//intron       24284625 chr2:70889560-70889561(-) m6A 3'UTR//intron       24284625 chr2:70889574-70889575(-) m6A 3'UTR//intron       24284625 chr2:70889689-70889690(-) m6A 3'UTR//intron       24284625//24981863 chr2:70890606-70890607(-) m6A CDS       24284625//25456834//24981863//27773536 chr2:70890687-70890688(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536 chr2:70890692-70890693(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27773536 chr2:70890816-70890817(-) m6A 3'UTR//CDS//exon       24284625//25456834//24981863//27371828//27773536 chr2:70890846-70890847(-) m6A 3'UTR//CDS//exon       24981863 chr2:70890852-70890853(-) m6A 3'UTR//CDS//exon       24209618//24981863 chr2:70900048-70900049(-) m6A CDS//exon       24209618//24981863 chr2:70900126-70900127(-) m6A CDS//exon       24209618//24981863 chr2:70900450-70900451(-) m6A CDS//exon//intron       24981863 chr2:70900455-70900456(-) m6A CDS//exon//intron       24981863 chr2:70901816-70901817(-) m6A CDS       24981863//27773536 chr2:70901822-70901823(-) m6A CDS       24981863//27773536 chr2:70902461-70902462(-) m6A 3'UTR//intron       24981863 chr2:70902474-70902475(-) m6A 3'UTR//intron       24981863 chr2:70902479-70902480(-) m6A 3'UTR//intron       24981863 chr2:70902515-70902516(-) m6A 3'UTR//intron       24981863 chr2:70902523-70902524(-) m6A 3'UTR//intron       24981863 chr2:70903606-70903607(-) m6A 3'UTR//intron       25456834 chr2:70903645-70903646(-) m6A 3'UTR//intron       25456834//24981863 chr2:70903705-70903706(-) m6A 3'UTR//intron       25456834//24981863 chr2:70903743-70903744(-) m6A 3'UTR//intron       25456834//24981863 chr2:70903753-70903754(-) m6A 3'UTR//intron       25456834//24981863 chr2:70903847-70903848(-) m6A CDS//intron       25456834 chr2:70904003-70904004(-) m6A CDS//intron       24981863 chr2:70904944-70904945(-) m6A CDS//intron       27773536 chr2:70904950-70904951(-) m6A CDS//intron       27773536 chr2:70905840-70905841(-) m6A CDS//intron       27773536 chr2:70905927-70905928(-) m6A CDS//intron       27773536 chr2:70931499-70931500(-) m6A CDS       27773536 chr2:70931538-70931539(-) m6A CDS       27773536 chr2:70933409-70933410(-) m6A CDS       27773536 chr2:70933421-70933422(-) m6A CDS       27773536 chr2:70933552-70933553(-) m6A 5'UTR//CDS//exon       27773536 chr2:70940218-70940219(-) m6A 5'UTR//exon//intron       24981863 chr2:70940234-70940235(-) m6A 5'UTR//exon//intron       24981863 chr2:70940246-70940247(-) m6A 5'UTR//exon//intron       24981863 chr2:70995239-70995240(-) m6A 5'UTR//exon       24981863 chr2:70995260-70995261(-) m6A 5'UTR//exon       24981863 chr2:70995270-70995271(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ADD2	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H3-5p
Interactor2: ADD2

Evidence Support:

Prediction-Evidence	miRanda//PITA//RNAHybrid//Targetscan
Support Database	VmiReg