Detail Information

Basic Information:


  VIRBase ID:  

VHID00137996

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H1-3p:           PNCK:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H1-3p PNCK
miRBase
Accession/Entrez ID
MIMAT0015220 139728
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - BSTK3//CaMK1b

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase PNCK
chrX:152937214-152937215(-) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate PNCK
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H1-3p
Interactor2: PNCK

Evidence Support:


Prediction-Evidence miRanda//RNAHybrid
Support Database VmiReg

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