Basic Information:

  VIRBase ID:  

VHID00136868

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H1-3p:  MIMAT0015220          TBX21:  NM_013351     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H1-3p	TBX21
miRBase Accession/Entrez ID	MIMAT0015220	30009
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	T-bet//T-PET//TBET//TBLYM

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TBX21	chr17:45817598(+) A-I      intronic chr17:45817572(+) A-I      intronic chr17:45817562(+) A-I      intronic chr17:45817574(+) A-I      intronic chr17:45817599(+) A-I      intronic chr17:45817614(+) A-I      intronic chr17:45816079(+) A-I      intronic chr17:45818002(+) A-I      intronic chr17:45818008(+) A-I      intronic chr17:45818011(+) A-I      intronic chr17:45818017(+) A-I      intronic chr17:45815689(+) A-I      intronic chr17:45817845(+) A-I      intronic chr17:45817976(+) A-I      intronic chr17:45817875(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TBX21	chr17:45811154-45811155(+) m6A CDS//exon       - chr17:45811190-45811191(+) m6A CDS//exon       - chr17:45811209-45811210(+) m6A CDS//exon       - chr17:45811227-45811228(+) m6A CDS//exon       - chr17:45811282-45811283(+) m6A CDS//exon       - chr17:45822480-45822481(+) m6A CDS       - chr17:45822494-45822495(+) m6A CDS       - chr17:45822524-45822525(+) m6A CDS       - chr17:45822532-45822533(+) m6A CDS       - chr17:45822555-45822556(+) m6A CDS       - chr17:45822596-45822597(+) m6A CDS       - chr17:45822610-45822611(+) m6A CDS       - chr17:45822704-45822705(+) m6A CDS       - chr17:45822753-45822754(+) m6A 3'UTR       26404942 chr17:45822759-45822760(+) m6A 3'UTR       26404942 chr17:45822780-45822781(+) m6A 3'UTR       26404942 chr17:45822810-45822811(+) m6A 3'UTR       26404942 chr17:45822921-45822922(+) m6A 3'UTR       - chr17:45823019-45823020(+) m6A 3'UTR       - chr17:45823083-45823084(+) m6A 3'UTR       - chr17:45823098-45823099(+) m6A 3'UTR       - chr17:45823173-45823174(+) m6A 3'UTR       - chr17:45823222-45823223(+) m6A 3'UTR       - chr17:45823238-45823239(+) m6A 3'UTR       - chr17:45823266-45823267(+) m6A 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TBX21	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H1-3p
Interactor2: TBX21

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg