Detail Information

Basic Information:


  VIRBase ID:  

VHID00135042

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:           SAMD7:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H18 SAMD7
miRBase
Accession/Entrez ID
MIMAT0014696 344658
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SAMD7
chr3:169636883(+) A-I      intronic
chr3:169636891(+) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SAMD7
chr3:169650613-169650614(+) m6A intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SAMD7
Exosome Blood     -
Membrane K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H18
Interactor2: SAMD7

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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