Detail Information

Basic Information:


  VIRBase ID:  

VHID00135018

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:           FAM151A:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H18 FAM151A
miRBase
Accession/Entrez ID
MIMAT0014696 338094
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - C1orf179

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase FAM151A
chr1:55074914-55074915(-) m6A 3'UTR       25456834//27773535
chr1:55074944-55074945(-) m6A CDS       25456834//27773535
chr1:55074968-55074969(-) m6A CDS       25456834//24981863//27773535
chr1:55075008-55075009(-) m6A CDS       25456834//27773535
chr1:55075013-55075014(-) m6A CDS       25456834//27773535
chr1:55075041-55075042(-) m6A CDS       25456834//24981863//27773535
chr1:55075225-55075226(-) m6A CDS//intron       24284625//25456834
chr1:55075477-55075478(-) m6A CDS//intron       24209618//25456834//24981863
chr1:55075559-55075560(-) m6A CDS//intron       25456834//24981863
chr1:55075572-55075573(-) m6A CDS//intron       25456834//24981863
chr1:55075589-55075590(-) m6A CDS//intron       25456834//24981863
chr1:55089113-55089114(-) m6A 5'UTR       27773535

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate FAM151A
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H18
Interactor2: FAM151A

Evidence Support:


Prediction-Evidence miRanda//PITA//RNAHybrid//Targetscan
Support Database VmiReg

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