Basic Information:

  VIRBase ID:  

VHID00134962

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          ASPHD1:  NM_181718     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	ASPHD1
miRBase Accession/Entrez ID	MIMAT0014696	253982
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ASPHD1	chr16:29915647(+) A-I      intronic chr16:29914773(+) A-I      intronic chr16:29914490(+) A-I      intronic chr16:29914043(+) A-I      intronic chr16:29914733(+) A-I      intronic chr16:29914728(+) A-I      intronic chr16:29914656(+) A-I      intronic chr16:29914734(+) A-I      intronic chr16:29914557(+) A-I      intronic chr16:29914556(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ASPHD1	chr16:29911943-29911944(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr16:29912024-29912025(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr16:29912044-29912045(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr16:29912068-29912069(+) m6A 5'UTR//intron       24284625//24209618//25456834//24981863 chr16:29912236-29912237(+) m1A 5'UTR//intron       26863196 chr16:29912330-29912331(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912349-29912350(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912377-29912378(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912415-29912416(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912435-29912436(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912443-29912444(+) m6A CDS//intron       24284625//24209618//25456834//24981863 chr16:29912596-29912597(+) m6A CDS//intron       24284625 chr16:29912708-29912709(+) m6A CDS//intron       - chr16:29912872-29912873(+) m6A 5'UTR//CDS       24284625 chr16:29912959-29912960(+) m6A 5'UTR//CDS       24284625//25456834//24981863 chr16:29912980-29912981(+) m6A 5'UTR//CDS       24284625//25456834//24981863//22575960 chr16:29912991-29912992(+) m6A 5'UTR//CDS       24284625//25456834//24981863//22575960 chr16:29917147-29917148(+) m6A CDS       24284625//22575960 chr16:29917210-29917211(+) m6A CDS       24284625//25456834 chr16:29917254-29917255(+) m6A 3'UTR       24284625//25456834//24981863 chr16:29917289-29917290(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:29917332-29917333(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr16:29930898-29930899(+) m6A 3'UTR       24981863 chr16:29930911-29930912(+) m6A 3'UTR       24981863 chr16:29930924-29930925(+) m6A 3'UTR       24981863 chr16:29930936-29930937(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ASPHD1	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: ASPHD1

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg