Basic Information:

  VIRBase ID:  

VHID00134949

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          TBC1D32:  NM_152730     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	TBC1D32
miRBase Accession/Entrez ID	MIMAT0014696	221322
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BROMI//C6orf170//C6orf171

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TBC1D32	chr6:121483341(-) A-I      intronic chr6:121483333(-) A-I      intronic chr6:121413942(-) A-I      intronic chr6:121413950(-) A-I      intronic chr6:121483354(-) A-I      intronic chr6:121412988(-) A-I      intronic chr6:121483345(-) A-I      intronic chr6:121580418(-) A-I      intronic chr6:121580361(-) A-I      intronic chr6:121580278(-) A-I      intronic chr6:121580252(-) A-I      intronic chr6:121580226(-) A-I      intronic chr6:121577931(-) A-I      intronic chr6:121644974(-) A-I      intronic chr6:121644973(-) A-I      intronic chr6:121628794(-) A-I      intronic chr6:121615023(-) A-I      intronic chr6:121598598(-) A-I      intronic chr6:121598593(-) A-I      intronic chr6:121598587(-) A-I      intronic chr6:121598551(-) A-I      intronic chr6:121598533(-) A-I      intronic chr6:121598526(-) A-I      intronic chr6:121598512(-) A-I      intronic chr6:121598499(-) A-I      intronic chr6:121597054(-) A-I      intronic chr6:121597053(-) A-I      intronic chr6:121655089(-) A-I      intronic chr6:121415586(-) A-I      intronic chr6:121577964(-) A-I      intronic chr6:121649570(-) A-I      intronic chr6:121583909(-) A-I      intronic chr6:121577891(-) A-I      intronic chr6:121401541(-) A-I      3'UTR chr6:121580460(-) A-I      intronic chr6:121650746(-) A-I      intronic chr6:121409267(-) A-I      intronic chr6:121409304(-) A-I      intronic chr6:121415585(-) A-I      intronic chr6:121634497(-) A-I      intronic chr6:121580281(-) A-I      intronic chr6:121634502(-) A-I      intronic chr6:121578055(-) A-I      intronic chr6:121580344(-) A-I      intronic chr6:121578000(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TBC1D32	chr6:121401871-121401872(-) m6A 3'UTR//exon       27773535 chr6:121401907-121401908(-) m6A 3'UTR//exon       27773535 chr6:121401931-121401932(-) m6A 3'UTR//CDS//exon       27773535 chr6:121401938-121401939(-) m6A 3'UTR//CDS//exon       27773535 chr6:121401947-121401948(-) m6A 3'UTR//CDS//exon       27773535 chr6:121401963-121401964(-) m6A 3'UTR//CDS//exon       27773535 chr6:121401971-121401972(-) m6A 3'UTR//CDS//exon       27773535 chr6:121401976-121401977(-) m6A 3'UTR//CDS//exon       27773535 chr6:121417295-121417296(-) m6A exon//intron       27773535 chr6:121417300-121417301(-) m6A exon//intron       27773535 chr6:121417319-121417320(-) m6A exon//intron       27773535 chr6:121638735-121638736(-) m6A 3'UTR//CDS       24981863 chr6:121638788-121638789(-) m6A 3'UTR//CDS       24981863 chr6:121655553-121655554(-) m6A CDS       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TBC1D32	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Membrane HCC cell line (HepG2)|K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: TBC1D32

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg