Detail Information

Basic Information:


  VIRBase ID:  

VHID00134890

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:           OTUD7A:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H18 OTUD7A
miRBase
Accession/Entrez ID
MIMAT0014696 161725
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - C15orf16//C16ORF15//CEZANNE2//OTUD7

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR OTUD7A
chr15:31918814(-) A-I      intronic
chr15:31930862(-) A-I      intronic
chr15:31918825(-) A-I      intronic
chr15:31930877(-) A-I      intronic
chr15:31788563(-) A-I      intronic
chr15:31909019(-) A-I      intronic
chr15:31909020(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase OTUD7A
chr15:31776499-31776500(-) m6A CDS       24284625//25456834//24981863//27773536//22608085
chr15:31776518-31776519(-) m6A CDS       24284625//25456834//24981863//27773536//22608085
chr15:31776587-31776588(-) m1A CDS       26863196
chr15:31776613-31776614(-) m6A CDS       24284625//25456834//24981863//27773536//22608085
chr15:31776685-31776686(-) m6A CDS       24284625//25456834//24981863//27773536//22608085
chr15:31776760-31776761(-) m6A CDS       24284625//25456834//24981863//22608085
chr15:31776793-31776794(-) m6A CDS       24284625//25456834//24981863//22608085
chr15:31776847-31776848(-) m6A CDS       24284625//25456834//24981863//22608085
chr15:31776853-31776854(-) m6A CDS       24284625//25456834//24981863//22608085
chr15:31779401-31779402(-) m6A CDS       24284625
chr15:31779451-31779452(-) m6A CDS       24284625
chr15:31779699-31779700(-) m6A CDS       24284625
chr15:31779711-31779712(-) m6A CDS       24284625
chr15:31796015-31796016(-) m6A CDS       -
chr15:31819486-31819487(-) m6A CDS       24284625
chr15:32058124-32058125(-) m6A intron       22608085
chr15:32058129-32058130(-) m6A intron       22608085
chr15:32058152-32058153(-) m6A intron       22608085
chr15:32162809-32162810(-) m6A 5'UTR//intron       25456834
chr15:32162859-32162860(-) m6A 5'UTR//intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate OTUD7A
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H18
Interactor2: OTUD7A

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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