Basic Information:

  VIRBase ID:  

VHID00134604

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          NTNG2:  NM_032536     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	NTNG2
miRBase Accession/Entrez ID	MIMAT0014696	84628
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bA479K20.1//LHLL9381//Lmnt2//NEDBASH//NTNG1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NTNG2	chr9:135096016(+) A-I      intronic chr9:135096021(+) A-I      intronic chr9:135052451(+) A-I      intronic chr9:135096038(+) A-I      intronic chr9:135096073(+) A-I      intronic chr9:135096024(+) A-I      intronic chr9:135054065(+) A-I      intronic chr9:135094696(+) A-I      intronic chr9:135094702(+) A-I      intronic chr9:135051474(+) A-I      intronic chr9:135066974(+) A-I      intronic chr9:135052503(+) A-I      intronic chr9:135050216(+) A-I      intronic chr9:135052571(+) A-I      intronic chr9:135050162(+) A-I      intronic chr9:135052513(+) A-I      intronic chr9:135088603(+) A-I      intronic chr9:135054222(+) A-I      intronic chr9:135051478(+) A-I      intronic chr9:135098235(+) A-I      intronic chr9:135052499(+) A-I      intronic chr9:135065365(+) A-I      intronic chr9:135050230(+) A-I      intronic chr9:135053259(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NTNG2	chr9:135041793-135041794(+) m6A 5'UTR//intron       24981863 chr9:135041812-135041813(+) m6A 5'UTR//intron       24981863 chr9:135042207-135042208(+) m6A 5'UTR       24284625//24981863 chr9:135042270-135042271(+) m6A CDS       24284625//24209618//24981863 chr9:135042360-135042361(+) m6A CDS       24284625//24209618//25456834//24981863 chr9:135042405-135042406(+) m6A CDS       24284625//24209618//24981863 chr9:135073605-135073606(+) m6A CDS       - chr9:135073647-135073648(+) m6A CDS       - chr9:135073788-135073789(+) m6A CDS       24284625//25456834//24981863 chr9:135073830-135073831(+) m6A CDS       25456834//24981863 chr9:135117406-135117407(+) m6A CDS//exon       24209618 chr9:135117874-135117875(+) m6A 3'UTR       24209618 chr9:135117923-135117924(+) m6A 3'UTR       24209618 chr9:135118004-135118005(+) m6A 3'UTR       24209618//24981863 chr9:135118039-135118040(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NTNG2	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: NTNG2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg