Basic Information:

  VIRBase ID:  

VHID00134539

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          ISG20L2:  NM_030980     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	ISG20L2
miRBase Accession/Entrez ID	MIMAT0014696	81875
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HSD38

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ISG20L2	chr1:156692575(-) A-I      3'UTR chr1:156692603(-) A-I      3'UTR chr1:156692602(-) A-I      3'UTR chr1:156692576(-) A-I      3'UTR chr1:156692623(-) A-I      3'UTR chr1:156692618(-) A-I      3'UTR chr1:156694773(-) A-I      ncRNA chr1:156694798(-) A-I      ncRNA chr1:156692626(-) A-I      3'UTR chr1:156692594(-) A-I      3'UTR chr1:156692566(-) A-I      3'UTR chr1:156692655(-) A-I      3'UTR chr1:156692521(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ISG20L2	chr1:156692614-156692615(-) m6A 3'UTR//exon       24209618 chr1:156692918-156692919(-) m6A 3'UTR//exon       24284625//24209618//27773535//22608085 chr1:156693005-156693006(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156693067-156693068(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156693075-156693076(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156693087-156693088(-) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156693144-156693145(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156693239-156693240(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:156693874-156693875(-) m6A exon//intron       24284625//27773535 chr1:156693903-156693904(-) m6A exon//intron       24284625 chr1:156693952-156693953(-) m6A CDS//exon       24284625//22575960 chr1:156694286-156694287(-) m6A exon//intron       24284625//27773535 chr1:156694345-156694346(-) m6A exon//intron       24284625//24209618//27773535 chr1:156695606-156695607(-) m6A exon//intron       24284625//24981863//27773535 chr1:156696765-156696766(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr1:156696773-156696774(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:156696874-156696875(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr1:156696971-156696972(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//22575960//22608085 chr1:156696998-156696999(-) m6A CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr1:156697166-156697167(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr1:156697177-156697178(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr1:156697203-156697204(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr1:156697227-156697228(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//27773536//22575960//22608085 chr1:156697254-156697255(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:156697273-156697274(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:156697310-156697311(-) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//27773535//27371828//22575960//22608085 chr1:156697408-156697409(-) m6A CDS//exon       24284625//24209618//24981863//28052920//27773535//27371828//22575960//22608085 chr1:156697533-156697534(-) m6A 5'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr1:156697548-156697549(-) m6A 5'UTR//exon       24284625//24209618//24981863//27773535//22608085 chr1:156697772-156697773(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:156697801-156697802(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:156697807-156697808(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:156697862-156697863(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:156698073-156698074(-) m6A 5'UTR//intron       24284625//24209618//25456834//22608085 chr1:156698218-156698219(-) m6A 5'UTR//exon       24284625//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ISG20L2	Chromatin K562 cells     - Cytosol K562 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: ISG20L2

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg