Basic Information:

  VIRBase ID:  

VHID00134489

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          PLPPR3:  NM_001270366     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	PLPPR3
miRBase Accession/Entrez ID	MIMAT0014696	79948
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LPPR3//LPR3//PRG-2//PRG2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLPPR3	chr19:818535(-) A-I      intronic chr19:817546(-) A-I      intronic chr19:817424(-) A-I      intronic chr19:818288(-) A-I      intronic chr19:818483(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLPPR3	chr19:812786-812787(-) m6A CDS       25456834//27773536 chr19:812858-812859(-) m6A CDS       25456834//27773536 chr19:813005-813006(-) m6A CDS       27773536 chr19:813415-813416(-) m6A CDS       25456834//24981863//27773536 chr19:813620-813621(-) m6A CDS       25456834//24981863//27773536//22608085 chr19:813656-813657(-) m6A CDS       25456834//24981863//27773536//22608085 chr19:813696-813697(-) m6A CDS       25456834//24981863//27773536//22608085 chr19:814581-814582(-) m6A CDS//intron       - chr19:814744-814745(-) m6A CDS       - chr19:814927-814928(-) m6A CDS       - chr19:821804-821805(-) m6A 5'UTR//intron       25456834//27773536 chr19:821822-821823(-) m6A 5'UTR//intron       25456834//27773536 chr19:821861-821862(-) m6A 5'UTR//intron       25456834//27773536 chr19:821885-821886(-) m6A 5'UTR//intron       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLPPR3	Exosome Blood     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: PLPPR3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg