Basic Information:

  VIRBase ID:  

VHID00134432

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          MRPL57:  NM_024026     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	MRPL57
miRBase Accession/Entrez ID	MIMAT0014696	78988
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bMRP63//MRP63

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	MRPL57	chr13:21752795(+) A-I      3'UTR chr13:21752789(+) A-I      3'UTR chr13:21752774(+) A-I      3'UTR chr13:21752430(+) A-I      3'UTR chr13:21751961(+) A-I      3'UTR chr13:21752501(+) A-I      3'UTR chr13:21752455(+) A-I      3'UTR chr13:21752987(+) A-I      3'UTR chr13:21753013(+) A-I      3'UTR chr13:21752351(+) A-I      3'UTR chr13:21751997(+) A-I      3'UTR chr13:21753096(+) A-I      3'UTR chr13:21752456(+) A-I      3'UTR chr13:21751988(+) A-I      3'UTR chr13:21752986(+) A-I      3'UTR chr13:21751867(+) A-I      3'UTR chr13:21752520(+) A-I      3'UTR chr13:21752810(+) A-I      3'UTR chr13:21752017(+) A-I      3'UTR chr13:21752798(+) A-I      3'UTR chr13:21753032(+) A-I      3'UTR chr13:21752417(+) A-I      3'UTR chr13:21752400(+) A-I      3'UTR chr13:21752461(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	MRPL57	chr13:21751155-21751156(+) m6A CDS       24284625//24981863//22575960 chr13:21751188-21751189(+) m6A CDS       24284625//22575960 chr13:21751323-21751324(+) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751427-21751428(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751435-21751436(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751465-21751466(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751481-21751482(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751489-21751490(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22575960//22608085 chr13:21751527-21751528(+) m6A 3'UTR       24284625//24209618//24981863//27773535//22608085 chr13:21751760-21751761(+) m6A 3'UTR       24981863//22608085 chr13:21751774-21751775(+) m6A 3'UTR       24981863//22608085 chr13:21751805-21751806(+) m6A 3'UTR       24981863//22608085 chr13:21751909-21751910(+) m6A 3'UTR       24981863//22608085 chr13:21751932-21751933(+) m6A 3'UTR       24981863//22608085 chr13:21752028-21752029(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr13:21752104-21752105(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr13:21752266-21752267(+) m6A 3'UTR       24981863 chr13:21752376-21752377(+) m6A 3'UTR       24209618 chr13:21752399-21752400(+) m6A 3'UTR       24209618 chr13:21752607-21752608(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr13:21752624-21752625(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr13:21752643-21752644(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr13:21752654-21752655(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr13:21752760-21752761(+) m6A 3'UTR       22608085 chr13:21752783-21752784(+) m6A 3'UTR       22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	MRPL57	Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: MRPL57

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg