Basic Information:

  VIRBase ID:  

VHID00134336

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:  MIMAT0014696          ISLR2:  NM_001130136     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H18	ISLR2
miRBase Accession/Entrez ID	MIMAT0014696	57611
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	LINX

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ISLR2	chr15:74426028-74426029(+) m6A CDS//intron       25456834 chr15:74426231-74426232(+) m6A CDS//intron       25456834 chr15:74426255-74426256(+) m6A CDS//intron       25456834 chr15:74426264-74426265(+) m6A CDS//intron       25456834 chr15:74426330-74426331(+) m6A CDS//intron       25456834 chr15:74426385-74426386(+) m6A CDS//intron       25456834 chr15:74426407-74426408(+) m6A CDS//intron       25456834 chr15:74426434-74426435(+) m6A CDS//intron       25456834 chr15:74426449-74426450(+) m6A CDS//intron       25456834 chr15:74426482-74426483(+) m6A CDS//intron       25456834 chr15:74427025-74427026(+) m6A CDS//intron       25456834 chr15:74427148-74427149(+) m6A CDS//intron       25456834 chr15:74427160-74427161(+) m6A CDS//intron       25456834 chr15:74428599-74428600(+) m6A 3'UTR//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ISLR2	Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841 Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H18
Interactor2: ISLR2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg