Detail Information

Basic Information:


  VIRBase ID:  

VHID00134007

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:           AKAP8L:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H18 AKAP8L
miRBase
Accession/Entrez ID		 MIMAT0014696 26993
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - HA95//HAP95//NAKAP//NAKAP95

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR AKAP8L
chr19:15497641(-) A-I      intronic
chr19:15506232(-) A-I      intronic
chr19:15502896(-) A-I      intronic
chr19:15501183(-) A-I      intronic
chr19:15501154(-) A-I      intronic
chr19:15498542(-) A-I      intronic
chr19:15506302(-) A-I      intronic
chr19:15493287(-) A-I      intronic
chr19:15493269(-) A-I      intronic
chr19:15493545(-) A-I      intronic
chr19:15506270(-) A-I      intronic
chr19:15494907(-) A-I      intronic
chr19:15506293(-) A-I      intronic
chr19:15506301(-) A-I      intronic
chr19:15493567(-) A-I      intronic
chr19:15497591(-) A-I      intronic
chr19:15493218(-) A-I      intronic
chr19:15493110(-) A-I      intronic
chr19:15493111(-) A-I      intronic
chr19:15493137(-) A-I      intronic
chr19:15493232(-) A-I      intronic
chr19:15493519(-) A-I      intronic
chr19:15493526(-) A-I      intronic
chr19:15493531(-) A-I      intronic
chr19:15493558(-) A-I      intronic
chr19:15493559(-) A-I      intronic
chr19:15493583(-) A-I      intronic
chr19:15493585(-) A-I      intronic
chr19:15493655(-) A-I      intronic
chr19:15493662(-) A-I      intronic
chr19:15494083(-) A-I      intronic
chr19:15494123(-) A-I      intronic
chr19:15494128(-) A-I      intronic
chr19:15494137(-) A-I      intronic
chr19:15494840(-) A-I      intronic
chr19:15494857(-) A-I      intronic
chr19:15494875(-) A-I      intronic
chr19:15494881(-) A-I      intronic
chr19:15494883(-) A-I      intronic
chr19:15494962(-) A-I      intronic
chr19:15494963(-) A-I      intronic
chr19:15495715(-) A-I      intronic
chr19:15495747(-) A-I      intronic
chr19:15496609(-) A-I      intronic
chr19:15497558(-) A-I      intronic
chr19:15497566(-) A-I      intronic
chr19:15497585(-) A-I      intronic
chr19:15497607(-) A-I      intronic
chr19:15497608(-) A-I      intronic
chr19:15497643(-) A-I      intronic
chr19:15497648(-) A-I      intronic
chr19:15497663(-) A-I      intronic
chr19:15497688(-) A-I      intronic
chr19:15498499(-) A-I      intronic
chr19:15498515(-) A-I      intronic
chr19:15498537(-) A-I      intronic
chr19:15498546(-) A-I      intronic
chr19:15505979(-) A-I      intronic
chr19:15498565(-) A-I      intronic
chr19:15498607(-) A-I      intronic
chr19:15498648(-) A-I      intronic
chr19:15505917(-) A-I      intronic
chr19:15505926(-) A-I      intronic
chr19:15505933(-) A-I      intronic
chr19:15505946(-) A-I      intronic
chr19:15505989(-) A-I      intronic
chr19:15505913(-) A-I      intronic
chr19:15505909(-) A-I      intronic
chr19:15505908(-) A-I      intronic
chr19:15505898(-) A-I      intronic
chr19:15505475(-) A-I      intronic
chr19:15506049(-) A-I      intronic
chr19:15506072(-) A-I      intronic
chr19:15506203(-) A-I      intronic
chr19:15506216(-) A-I      intronic
chr19:15506236(-) A-I      intronic
chr19:15505470(-) A-I      intronic
chr19:15506038(-) A-I      intronic
chr19:15506046(-) A-I      intronic
chr19:15506048(-) A-I      intronic
chr19:15517370(-) A-I      intronic
chr19:15506238(-) A-I      intronic
chr19:15506279(-) A-I      intronic
chr19:15506290(-) A-I      intronic
chr19:15517375(-) A-I      intronic
chr19:15517471(-) A-I      intronic
chr19:15517477(-) A-I      intronic
chr19:15517505(-) A-I      intronic
chr19:15517884(-) A-I      intronic
chr19:15518053(-) A-I      intronic
chr19:15518903(-) A-I      intronic
chr19:15519571(-) A-I      intronic
chr19:15520865(-) A-I      intronic
chr19:15520925(-) A-I      intronic
chr19:15520981(-) A-I      intronic
chr19:15521721(-) A-I      intronic
chr19:15521906(-) A-I      intronic
chr19:15506296(-) A-I      intronic
chr19:15506303(-) A-I      intronic
chr19:15506308(-) A-I      intronic
chr19:15506330(-) A-I      intronic
chr19:15522373(-) A-I      intronic
chr19:15522378(-) A-I      intronic
chr19:15522891(-) A-I      intronic
chr19:15522897(-) A-I      intronic
chr19:15505452(-) A-I      intronic
chr19:15505447(-) A-I      intronic
chr19:15505439(-) A-I      intronic
chr19:15522907(-) A-I      intronic
chr19:15505428(-) A-I      intronic
chr19:15504675(-) A-I      intronic
chr19:15504654(-) A-I      intronic
chr19:15504651(-) A-I      intronic
chr19:15504575(-) A-I      intronic
chr19:15504569(-) A-I      intronic
chr19:15504534(-) A-I      intronic
chr19:15504527(-) A-I      intronic
chr19:15504488(-) A-I      intronic
chr19:15503294(-) A-I      intronic
chr19:15503248(-) A-I      intronic
chr19:15503246(-) A-I      intronic
chr19:15503220(-) A-I      intronic
chr19:15503212(-) A-I      intronic
chr19:15503207(-) A-I      intronic
chr19:15503104(-) A-I      intronic
chr19:15503102(-) A-I      intronic
chr19:15502931(-) A-I      intronic
chr19:15502924(-) A-I      intronic
chr19:15502917(-) A-I      intronic
chr19:15502895(-) A-I      intronic
chr19:15522936(-) A-I      intronic
chr19:15523085(-) A-I      intronic
chr19:15523107(-) A-I      intronic
chr19:15523110(-) A-I      intronic
chr19:15525448(-) A-I      intronic
chr19:15525536(-) A-I      intronic
chr19:15525571(-) A-I      intronic
chr19:15525572(-) A-I      intronic
chr19:15526083(-) A-I      intronic
chr19:15526117(-) A-I      intronic
chr19:15526139(-) A-I      intronic
chr19:15526161(-) A-I      intronic
chr19:15526182(-) A-I      intronic
chr19:15502555(-) A-I      intronic
chr19:15502546(-) A-I      intronic
chr19:15502545(-) A-I      intronic
chr19:15502544(-) A-I      intronic
chr19:15502533(-) A-I      intronic
chr19:15502530(-) A-I      intronic
chr19:15502488(-) A-I      intronic
chr19:15502478(-) A-I      intronic
chr19:15502160(-) A-I      intronic
chr19:15502157(-) A-I      intronic
chr19:15502088(-) A-I      intronic
chr19:15502064(-) A-I      intronic
chr19:15502053(-) A-I      intronic
chr19:15502050(-) A-I      intronic
chr19:15502046(-) A-I      intronic
chr19:15502029(-) A-I      intronic
chr19:15505433(-) A-I      intronic
chr19:15502027(-) A-I      intronic
chr19:15501224(-) A-I      intronic
chr19:15501216(-) A-I      intronic
chr19:15501191(-) A-I      intronic
chr19:15501173(-) A-I      intronic
chr19:15501168(-) A-I      intronic
chr19:15501167(-) A-I      intronic
chr19:15501148(-) A-I      intronic
chr19:15501108(-) A-I      intronic
chr19:15501107(-) A-I      intronic
chr19:15501106(-) A-I      intronic
chr19:15501080(-) A-I      intronic
chr19:15501061(-) A-I      intronic
chr19:15501057(-) A-I      intronic
chr19:15501039(-) A-I      intronic
chr19:15498707(-) A-I      intronic
chr19:15498688(-) A-I      intronic
chr19:15498658(-) A-I      intronic
chr19:15502861(-) A-I      intronic
chr19:15502811(-) A-I      intronic
chr19:15502758(-) A-I      intronic
chr19:15526192(-) A-I      intronic
chr19:15526208(-) A-I      intronic
chr19:15526229(-) A-I      intronic
chr19:15526755(-) A-I      intronic
chr19:15526837(-) A-I      intronic
chr19:15526880(-) A-I      intronic
chr19:15526904(-) A-I      intronic
chr19:15526911(-) A-I      intronic
chr19:15526917(-) A-I      intronic
chr19:15526933(-) A-I      intronic
chr19:15493109(-) A-I      intronic
chr19:15522429(-) A-I      intronic
chr19:15516657(-) A-I      intronic
chr19:15516651(-) A-I      intronic
chr19:15516650(-) A-I      intronic
chr19:15506628(-) A-I      intronic
chr19:15506606(-) A-I      intronic
chr19:15506397(-) A-I      intronic
chr19:15506396(-) A-I      intronic
chr19:15506366(-) A-I      intronic
chr19:15506361(-) A-I      intronic
chr19:15506353(-) A-I      intronic
chr19:15506352(-) A-I      intronic
chr19:15502757(-) A-I      intronic
chr19:15502744(-) A-I      intronic
chr19:15502678(-) A-I      intronic
chr19:15502675(-) A-I      intronic
chr19:15502655(-) A-I      intronic
chr19:15502615(-) A-I      intronic
chr19:15502028(-) A-I      intronic
chr19:15502904(-) A-I      intronic
chr19:15506305(-) A-I      intronic
chr19:15526232(-) A-I      intronic
chr19:15502739(-) A-I      intronic
chr19:15498587(-) A-I      intronic
chr19:15502621(-) A-I      intronic
chr19:15497658(-) A-I      intronic
chr19:15497697(-) A-I      intronic
chr19:15506264(-) A-I      intronic
chr19:15518939(-) A-I      intronic
chr19:15506319(-) A-I      intronic
chr19:15497647(-) A-I      intronic
chr19:15498694(-) A-I      intronic
chr19:15502940(-) A-I      intronic
chr19:15496513(-) A-I      intronic
chr19:15497581(-) A-I      intronic
chr19:15497646(-) A-I      intronic
chr19:15498613(-) A-I      intronic
chr19:15506235(-) A-I      intronic
chr19:15505914(-) A-I      intronic
chr19:15517551(-) A-I      intronic
chr19:15497743(-) A-I      intronic
chr19:15521904(-) A-I      intronic
chr19:15504609(-) A-I      intronic
chr19:15506219(-) A-I      intronic
chr19:15506304(-) A-I      intronic
chr19:15518066(-) A-I      intronic
chr19:15516548(-) A-I      intronic
chr19:15505965(-) A-I      intronic
chr19:15497555(-) A-I      intronic
chr19:15502807(-) A-I      intronic
chr19:15504657(-) A-I      intronic
chr19:15506243(-) A-I      intronic
chr19:15502614(-) A-I      intronic
chr19:15497532(-) A-I      intronic
chr19:15506212(-) A-I      intronic
chr19:15506265(-) A-I      intronic
chr19:15526337(-) A-I      intronic
chr19:15518065(-) A-I      intronic
chr19:15498578(-) A-I      intronic
chr19:15497689(-) A-I      intronic
chr19:15498683(-) A-I      intronic
chr19:15497742(-) A-I      intronic
chr19:15498687(-) A-I      intronic
chr19:15498604(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED AKAP8L
chr19:15498604(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase AKAP8L
chr19:15490883-15490884(-) m6A 3'UTR//exon       27371828
chr19:15490888-15490889(-) m6A 3'UTR//exon       27371828
chr19:15491233-15491234(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr19:15491373-15491374(-) Y 3'UTR//CDS//exon       26075521
chr19:15492724-15492725(-) m6A exon//intron       27773535//27371828
chr19:15492729-15492730(-) m6A exon//intron       27773535//27371828
chr19:15492809-15492810(-) m6A exon//intron       27371828
chr19:15507967-15507968(-) m6A 3'UTR//CDS//exon       27773535//27371828
chr19:15507986-15507987(-) m6A 3'UTR//CDS//exon       27773535//27371828
chr19:15508347-15508348(-) m6A 3'UTR//CDS//exon       27773535
chr19:15508380-15508381(-) m6A 3'UTR//CDS//exon       27773535
chr19:15508390-15508391(-) m6A 3'UTR//CDS//exon       27773535
chr19:15508408-15508409(-) m6A 3'UTR//CDS//exon       27773535
chr19:15508417-15508418(-) m6A 3'UTR//CDS//exon       27773535
chr19:15508578-15508579(-) m6A 3'UTR//CDS//exon       24209618//27773535
chr19:15508631-15508632(-) m6A 3'UTR//CDS//exon       24209618//27773535
chr19:15508705-15508706(-) m6A exon//intron       24209618//27773535
chr19:15508787-15508788(-) m6A exon//intron       24284625
chr19:15508844-15508845(-) m6A exon//intron       24284625//24981863//27773535
chr19:15509084-15509085(-) m6A exon//intron       24284625//25456834//27371828
chr19:15509433-15509434(-) m6A exon//intron       24284625//25456834//24981863//27773535//27371828//27773536
chr19:15509481-15509482(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//27371828//27773536
chr19:15509524-15509525(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//27371828//27773536
chr19:15509541-15509542(-) m6A 3'UTR//CDS//exon//intron       24284625//25456834//24981863//27371828//27773536
chr19:15509769-15509770(-) m6A exon//intron       24284625//25456834//24981863//28052920//27371828//27773536
chr19:15509826-15509827(-) m6A exon//intron       24284625//25456834//24981863//28052920//27371828//27773536
chr19:15509886-15509887(-) m6A exon//intron       24284625//25456834//24981863//27371828//27773536
chr19:15509978-15509979(-) m6A exon//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:15510127-15510128(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536
chr19:15510151-15510152(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536
chr19:15510188-15510189(-) m6A 3'UTR//CDS//exon       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536
chr19:15510750-15510751(-) m6A exon//intron       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536
chr19:15510828-15510829(-) m6A exon//intron       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr19:15510998-15510999(-) m6A exon//intron       27371828
chr19:15511016-15511017(-) m6A exon//intron       25456834//24981863//27371828
chr19:15511043-15511044(-) m6A exon//intron       25456834//24981863//27371828
chr19:15511128-15511129(-) m1A 3'UTR//CDS//exon       26863196//26863410
chr19:15511233-15511234(-) m6A exon//intron       24284625//25456834//24981863//28052920//27773535//27371828//27773536//22575960
chr19:15511762-15511763(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr19:15511777-15511778(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr19:15511786-15511787(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr19:15511844-15511845(-) m1A 3'UTR//CDS//exon       26863196
chr19:15511977-15511978(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr19:15511983-15511984(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960
chr19:15511992-15511993(-) m6A 3'UTR//CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536
chr19:15512102-15512103(-) m6A 3'UTR//CDS//exon       27773535//27773536
chr19:15512168-15512169(-) m6A 3'UTR//CDS//exon//intron       24284625
chr19:15514829-15514830(-) m6A 5'UTR//CDS//exon//intron       -
chr19:15514837-15514838(-) m6A 5'UTR//CDS//exon//intron       -
chr19:15514844-15514845(-) m6A 5'UTR//CDS//exon//intron       -
chr19:15515078-15515079(-) m6A exon//intron       -
chr19:15521384-15521385(-) m6A 5'UTR//CDS//exon       24284625//24981863//27773535//27371828
chr19:15528504-15528505(-) m6A exon//intron       24284625//24981863//27773535//27371828
chr19:15529819-15529820(-) m6A 5'UTR//exon//intron       24981863

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate AKAP8L
Chromatin K562 cells     -
Cytosol K562 cells     -
Exosome Blood     -
Nucleolus K562 cells     -
Nucleoplasm K562 cells     -
Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H18
Interactor2: AKAP8L

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

Starting a new search, please wait ...