Detail Information

Basic Information:


  VIRBase ID:  

VHID00133273

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H18:           MPZ:      

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Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H18 MPZ
miRBase
Accession/Entrez ID
MIMAT0014696 4359
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - CHM//CHN2//CMT1//CMT1B//CMT2I//CMT2J//CMT4E//CMTDI3//CMTDID//DSS//HMSNIB//MPP//P0

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MPZ
chr1:161274930-161274931(-) m6A 3'UTR       27773535
chr1:161275198-161275199(-) m6A 3'UTR//exon//intron       27773535
chr1:161275480-161275481(-) m6A 3'UTR//exon       25456834
chr1:161275486-161275487(-) m6A 3'UTR//exon       25456834
chr1:161275501-161275502(-) m6A 3'UTR//exon       25456834
chr1:161275526-161275527(-) m6A 3'UTR//exon       25456834
chr1:161275741-161275742(-) m6A CDS//exon       -
chr1:161275816-161275817(-) m6A exon//intron       -
chr1:161275857-161275858(-) m6A exon//intron       -
chr1:161275874-161275875(-) m6A exon//intron       -
chr1:161275887-161275888(-) m6A exon//intron       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MPZ
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H18
Interactor2: MPZ

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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