Basic Information:

  VIRBase ID:  

VHID00132470

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:  MIMAT0014695          GLIS1:  NM_001390836     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H17	GLIS1
miRBase Accession/Entrez ID	MIMAT0014695	148979
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GLIS1	chr1:54167421(-) A-I      intronic chr1:54087612(-) A-I      intronic chr1:54087707(-) A-I      intronic chr1:53988763(-) A-I      intronic chr1:54169228(-) A-I      intronic chr1:54021091(-) A-I      intronic chr1:54188502(-) A-I      intronic chr1:54016596(-) A-I      intronic chr1:54165010(-) A-I      intronic chr1:53972635(-) A-I      intronic chr1:54173429(-) A-I      intronic chr1:53987587(-) A-I      intronic chr1:54064033(-) A-I      intronic chr1:54007246(-) A-I      intronic chr1:54168869(-) A-I      intronic chr1:54096363(-) A-I      intronic chr1:53971983(-) A-I      3'UTR chr1:54057312(-) A-I      intronic chr1:54021103(-) A-I      intronic chr1:54001123(-) A-I      intronic chr1:53981934(-) A-I      intronic chr1:53988750(-) A-I      intronic chr1:54021121(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GLIS1	chr1:53972298-53972299(-) m6A CDS       24284625 chr1:53972364-53972365(-) m6A CDS       24284625 chr1:53980419-53980420(-) m6A CDS       24284625 chr1:53995467-53995468(-) m6A CDS       24284625 chr1:54059892-54059893(-) m6A CDS       24284625//25456834//27773536 chr1:54059973-54059974(-) m6A CDS       24284625//25456834 chr1:54060266-54060267(-) m6A CDS       24284625 chr1:54060412-54060413(-) m6A CDS       24284625 chr1:54060443-54060444(-) m6A CDS       24284625 chr1:54060501-54060502(-) m6A CDS       24284625 chr1:54060507-54060508(-) m6A CDS       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GLIS1	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H17
Interactor2: GLIS1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid
Support Database	RepTar//VmiReg