Detail Information

Basic Information:


  VIRBase ID:  

VHID00132401

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:           C4orf36:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H17 C4orf36
miRBase
Accession/Entrez ID		 MIMAT0014695 132989
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - -

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR C4orf36
chr4:87822767(-) A-I      intronic
chr4:87835619(-) A-I      intronic
chr4:87829058(-) A-I      intronic
chr4:87828912(-) A-I      intronic
chr4:87828030(-) A-I      intronic
chr4:87828027(-) A-I      intronic
chr4:87827093(-) A-I      intronic
chr4:87827067(-) A-I      intronic
chr4:87826956(-) A-I      intronic
chr4:87826947(-) A-I      intronic
chr4:87826939(-) A-I      intronic
chr4:87826938(-) A-I      intronic
chr4:87840600(-) A-I      intronic
chr4:87826453(-) A-I      intronic
chr4:87826424(-) A-I      intronic
chr4:87826420(-) A-I      intronic
chr4:87826417(-) A-I      intronic
chr4:87803087(-) A-I      intronic
chr4:87826414(-) A-I      intronic
chr4:87826360(-) A-I      intronic
chr4:87826351(-) A-I      intronic
chr4:87826281(-) A-I      intronic
chr4:87826223(-) A-I      intronic
chr4:87824497(-) A-I      intronic
chr4:87822633(-) A-I      intronic
chr4:87822725(-) A-I      intronic
chr4:87824443(-) A-I      intronic
chr4:87824439(-) A-I      intronic
chr4:87822782(-) A-I      intronic
chr4:87841113(-) A-I      intronic
chr4:87842090(-) A-I      intronic
chr4:87842168(-) A-I      intronic
chr4:87842205(-) A-I      intronic
chr4:87842234(-) A-I      intronic
chr4:87844132(-) A-I      intronic
chr4:87844133(-) A-I      intronic
chr4:87844164(-) A-I      intronic
chr4:87844204(-) A-I      intronic
chr4:87844209(-) A-I      intronic
chr4:87844336(-) A-I      intronic
chr4:87844420(-) A-I      intronic
chr4:87840543(-) A-I      intronic
chr4:87803098(-) A-I      intronic
chr4:87844444(-) A-I      intronic
chr4:87844483(-) A-I      intronic
chr4:87844489(-) A-I      intronic
chr4:87844493(-) A-I      intronic
chr4:87844494(-) A-I      intronic
chr4:87845484(-) A-I      intronic
chr4:87845412(-) A-I      intronic
chr4:87844515(-) A-I      intronic
chr4:87810323(-) A-I      intronic
chr4:87836896(-) A-I      intronic
chr4:87844524(-) A-I      intronic
chr4:87845409(-) A-I      intronic
chr4:87845398(-) A-I      intronic
chr4:87844861(-) A-I      intronic
chr4:87844852(-) A-I      intronic
chr4:87844776(-) A-I      intronic
chr4:87844742(-) A-I      intronic
chr4:87844507(-) A-I      intronic
chr4:87844486(-) A-I      intronic
chr4:87844461(-) A-I      intronic
chr4:87844327(-) A-I      intronic
chr4:87842241(-) A-I      intronic
chr4:87842227(-) A-I      intronic
chr4:87835735(-) A-I      intronic
chr4:87835724(-) A-I      intronic
chr4:87822693(-) A-I      intronic
chr4:87822672(-) A-I      intronic
chr4:87820908(-) A-I      intronic
chr4:87801226(-) A-I      intronic
chr4:87801202(-) A-I      intronic
chr4:87801189(-) A-I      intronic
chr4:87801187(-) A-I      intronic
chr4:87801186(-) A-I      intronic
chr4:87801177(-) A-I      intronic
chr4:87844534(-) A-I      intronic
chr4:87844647(-) A-I      intronic
chr4:87844651(-) A-I      intronic
chr4:87844665(-) A-I      intronic
chr4:87844684(-) A-I      intronic
chr4:87844706(-) A-I      intronic
chr4:87844707(-) A-I      intronic
chr4:87844725(-) A-I      intronic
chr4:87844730(-) A-I      intronic
chr4:87844753(-) A-I      intronic
chr4:87844790(-) A-I      intronic
chr4:87845520(-) A-I      intronic
chr4:87842193(-) A-I      intronic
chr4:87841147(-) A-I      intronic
chr4:87844832(-) A-I      intronic
chr4:87844868(-) A-I      intronic
chr4:87844914(-) A-I      intronic
chr4:87845265(-) A-I      intronic
chr4:87845463(-) A-I      intronic
chr4:87845512(-) A-I      intronic
chr4:87845521(-) A-I      intronic
chr4:87845530(-) A-I      intronic
chr4:87845548(-) A-I      intronic
chr4:87810452(-) A-I      intronic
chr4:87810460(-) A-I      intronic
chr4:87818288(-) A-I      intronic
chr4:87818293(-) A-I      intronic
chr4:87818402(-) A-I      intronic
chr4:87845566(-) A-I      intronic
chr4:87845570(-) A-I      intronic
chr4:87845522(-) A-I      intronic
chr4:87841129(-) A-I      intronic
chr4:87845590(-) A-I      intronic
chr4:87845667(-) A-I      intronic
chr4:87845741(-) A-I      intronic
chr4:87818419(-) A-I      intronic
chr4:87836042(-) A-I      intronic
chr4:87820901(-) A-I      intronic
chr4:87821453(-) A-I      intronic
chr4:87821458(-) A-I      intronic
chr4:87821481(-) A-I      intronic
chr4:87835725(-) A-I      intronic
chr4:87836031(-) A-I      intronic
chr4:87836026(-) A-I      intronic
chr4:87835975(-) A-I      intronic
chr4:87836818(-) A-I      intronic
chr4:87836791(-) A-I      intronic
chr4:87836726(-) A-I      intronic
chr4:87836725(-) A-I      intronic
chr4:87836720(-) A-I      intronic
chr4:87836840(-) A-I      intronic
chr4:87840636(-) A-I      intronic
chr4:87840644(-) A-I      intronic
chr4:87845727(-) A-I      intronic
chr4:87845713(-) A-I      intronic
chr4:87845556(-) A-I      intronic
chr4:87845529(-) A-I      intronic
chr4:87845528(-) A-I      intronic
chr4:87835733(-) A-I      intronic
chr4:87835729(-) A-I      intronic
chr4:87835720(-) A-I      intronic
chr4:87835630(-) A-I      intronic
chr4:87845523(-) A-I      intronic
chr4:87820792(-) A-I      intronic
chr4:87845626(-) A-I      intronic
chr4:87844320(-) A-I      intronic
chr4:87822699(-) A-I      intronic
chr4:87845617(-) A-I      intronic
chr4:87820884(-) A-I      intronic
chr4:87842152(-) A-I      intronic
chr4:87842039(-) A-I      intronic
chr4:87845580(-) A-I      intronic
chr4:87845419(-) A-I      intronic
chr4:87828136(-) A-I      intronic
chr4:87844462(-) A-I      intronic
chr4:87838251(-) A-I      intronic
chr4:87827006(-) A-I      intronic
chr4:87841119(-) A-I      intronic
chr4:87845571(-) A-I      intronic
chr4:87845531(-) A-I      intronic
chr4:87844760(-) A-I      intronic
chr4:87845235(-) A-I      intronic
chr4:87845745(-) A-I      intronic
chr4:87845620(-) A-I      intronic
chr4:87838213(-) A-I      intronic
chr4:87801382(-) A-I      intronic
chr4:87844902(-) A-I      intronic
chr4:87845222(-) A-I      intronic
chr4:87845489(-) A-I      intronic
chr4:87845696(-) A-I      intronic
chr4:87819423(-) A-I      intronic
chr4:87840578(-) A-I      intronic
chr4:87845547(-) A-I      intronic
chr4:87845314(-) A-I      intronic
chr4:87844273(-) A-I      intronic
chr4:87840608(-) A-I      intronic
chr4:87805657(-) A-I      intronic
chr4:87805622(-) A-I      intronic
chr4:87826323(-) A-I      intronic
chr4:87844763(-) A-I      intronic
chr4:87805099(-) A-I      intronic
chr4:87823506(-) A-I      intronic
chr4:87845768(-) A-I      intronic
chr4:87841180(-) A-I      intronic
chr4:87844814(-) A-I      intronic
chr4:87845473(-) A-I      intronic
chr4:87822408(-) A-I      intronic
chr4:87820719(-) A-I      intronic
chr4:87845554(-) A-I      intronic
chr4:87844183(-) A-I      intronic
chr4:87838289(-) A-I      intronic
chr4:87845269(-) A-I      intronic
chr4:87822252(-) A-I      intronic
chr4:87820927(-) A-I      intronic
chr4:87853399(-) A-I      5'UTR
chr4:87853417(-) A-I      5'UTR
chr4:87853455(-) A-I      5'UTR
chr4:87853412(-) A-I      5'UTR
chr4:87853416(-) A-I      5'UTR
chr4:87853452(-) A-I      5'UTR
chr4:87842313(-) A-I      intronic
chr4:87844347(-) A-I      intronic
chr4:87845611(-) A-I      intronic
chr4:87838371(-) A-I      intronic
chr4:87844863(-) A-I      intronic
chr4:87838317(-) A-I      intronic
chr4:87842257(-) A-I      intronic
chr4:87840640(-) A-I      intronic
chr4:87845239(-) A-I      intronic
chr4:87844666(-) A-I      intronic
chr4:87805119(-) A-I      intronic
chr4:87844910(-) A-I      intronic
chr4:87844855(-) A-I      intronic
chr4:87840604(-) A-I      intronic
chr4:87822266(-) A-I      intronic
chr4:87841032(-) A-I      intronic
chr4:87822845(-) A-I      intronic
chr4:87844744(-) A-I      intronic
chr4:87828146(-) A-I      intronic
chr4:87845417(-) A-I      intronic
chr4:87844442(-) A-I      intronic
chr4:87836796(-) A-I      intronic
chr4:87844431(-) A-I      intronic
chr4:87835645(-) A-I      intronic
chr4:87821327(-) A-I      intronic
chr4:87805038(-) A-I      intronic
chr4:87844451(-) A-I      intronic
chr4:87835783(-) A-I      intronic
chr4:87844876(-) A-I      intronic
chr4:87844806(-) A-I      intronic
chr4:87840764(-) A-I      intronic
chr4:87845541(-) A-I      intronic
chr4:87844470(-) A-I      intronic
chr4:87844693(-) A-I      intronic
chr4:87818348(-) A-I      intronic
chr4:87820802(-) A-I      intronic
chr4:87844718(-) A-I      intronic
chr4:87840505(-) A-I      intronic
chr4:87803103(-) A-I      intronic
chr4:87844341(-) A-I      intronic
chr4:87838303(-) A-I      intronic
chr4:87824540(-) A-I      intronic
chr4:87844688(-) A-I      intronic
chr4:87845381(-) A-I      intronic
chr4:87844124(-) A-I      intronic
chr4:87844792(-) A-I      intronic
chr4:87845535(-) A-I      intronic
chr4:87844827(-) A-I      intronic
chr4:87805640(-) A-I      intronic
chr4:87841095(-) A-I      intronic
chr4:87845333(-) A-I      intronic
chr4:87805015(-) A-I      intronic
chr4:87824520(-) A-I      intronic
chr4:87824509(-) A-I      intronic
chr4:87826307(-) A-I      intronic
chr4:87845770(-) A-I      intronic
chr4:87822652(-) A-I      intronic
chr4:87845694(-) A-I      intronic
chr4:87836894(-) A-I      intronic
chr4:87823317(-) A-I      intronic
chr4:87822311(-) A-I      intronic
chr4:87820862(-) A-I      intronic
chr4:87822657(-) A-I      intronic
chr4:87816461(-) A-I      intronic
chr4:87841038(-) A-I      intronic
chr4:87844805(-) A-I      intronic
chr4:87801279(-) A-I      intronic
chr4:87840654(-) A-I      intronic
chr4:87844187(-) A-I      intronic
chr4:87841021(-) A-I      intronic
chr4:87841086(-) A-I      intronic
chr4:87845750(-) A-I      intronic
chr4:87845480(-) A-I      intronic
chr4:87826654(-) A-I      intronic
chr4:87844762(-) A-I      intronic
chr4:87845490(-) A-I      intronic
chr4:87844398(-) A-I      intronic
chr4:87828879(-) A-I      intronic
chr4:87827120(-) A-I      intronic
chr4:87835788(-) A-I      intronic
chr4:87838332(-) A-I      intronic
chr4:87804963(-) A-I      intronic
chr4:87827129(-) A-I      intronic
chr4:87801463(-) A-I      intronic
chr4:87826334(-) A-I      intronic
chr4:87844831(-) A-I      intronic
chr4:87823490(-) A-I      intronic
chr4:87827005(-) A-I      intronic
chr4:87823531(-) A-I      intronic
chr4:87844480(-) A-I      intronic
chr4:87822689(-) A-I      intronic
chr4:87845532(-) A-I      intronic
chr4:87842248(-) A-I      intronic
chr4:87845516(-) A-I      intronic
chr4:87818462(-) A-I      intronic
chr4:87841094(-) A-I      intronic
chr4:87844368(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED C4orf36
chr4:87797712(-) A-I intron -    22327324

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase C4orf36
chr4:87835426-87835427(-) m6A intron       -
chr4:87835485-87835486(-) m6A intron       -
chr4:87835503-87835504(-) m6A intron       -
chr4:87846738-87846739(-) m6A exon//intron       27773535
chr4:87846766-87846767(-) m6A exon//intron       27773535
chr4:87846818-87846819(-) m6A exon//intron       27773535
chr4:87846837-87846838(-) m6A exon//intron       27773535
chr4:87847055-87847056(-) m6A exon//intron       27773535
chr4:87847334-87847335(-) m6A exon//intron       27773535
chr4:87847352-87847353(-) m6A exon//intron       27773535
chr4:87847449-87847450(-) m6A 5'UTR//exon       27773535
chr4:87855687-87855688(-) m6A 5'UTR//exon//intron       27773535
chr4:87856727-87856728(-) m6A exon//intron       25456834
chr4:87856766-87856767(-) m6A exon//intron       25456834
chr4:87856775-87856776(-) m6A exon//intron       25456834
chr4:87857190-87857191(-) m6A exon       24284625//27773535
chr4:87857209-87857210(-) m6A exon       24284625//27773535//27371828
chr4:87857302-87857303(-) m6A exon       27773535
chr4:87857323-87857324(-) m6A exon       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate C4orf36
Chromatin K562 cells     -
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H17
Interactor2: C4orf36

Evidence Support:


Prediction-Evidence cRep//miRanda//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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