Basic Information:

  VIRBase ID:  

VHID00132329

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:  MIMAT0014695          UBALD1:  NM_001330467     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H17	UBALD1
miRBase Accession/Entrez ID	MIMAT0014695	124402
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM100A//PP11303

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	UBALD1	chr16:4660733(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	UBALD1	chr16:4658887-4658888(-) m6A 3'UTR//CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr16:4659008-4659009(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4659016-4659017(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr16:4659139-4659140(-) m6A 3'UTR//intron       24284625//24209618//24981863//27773535//22575960 chr16:4659297-4659298(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:4659312-4659313(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:4659372-4659373(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr16:4659381-4659382(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr16:4659386-4659387(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr16:4659469-4659470(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:4659486-4659487(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:4659503-4659504(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:4659601-4659602(-) m6A 3'UTR//intron       24284625//24209618//25456834//24981863//28052920//26404942//27773535//27371828//27773536//22575960//22608085 chr16:4659669-4659670(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//28052920//26404942//27371828//27773536//22575960//22608085 chr16:4659706-4659707(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//26404942//27371828//27773536//22575960//22608085 chr16:4659734-4659735(-) m6A 3'UTR//CDS//intron       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr16:4660091-4660092(-) m6A CDS//intron       24284625//27773535 chr16:4660528-4660529(-) m6A 5'UTR//CDS//intron       24284625//24209618 chr16:4660555-4660556(-) m6A 5'UTR//CDS//intron       24284625//24209618 chr16:4660617-4660618(-) m6A 5'UTR//CDS//intron       24284625//24209618//27773536 chr16:4660730-4660731(-) m6A 5'UTR//intron       - chr16:4661127-4661128(-) m6A 5'UTR//intron       24284625 chr16:4661139-4661140(-) m6A 5'UTR//intron       24284625 chr16:4661164-4661165(-) m6A 5'UTR//intron       24284625 chr16:4664357-4664358(-) m6A 5'UTR//intron       25456834//27773536 chr16:4664787-4664788(-) m6A CDS//intron       24209618//24981863//27371828//22575960 chr16:4664965-4664966(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	UBALD1	Exosome Blood     - Ribosome-free cytosol Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H17
Interactor2: UBALD1

Evidence Support:

Prediction-Evidence	miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg