Basic Information:

  VIRBase ID:  

VHID00131895

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:  MIMAT0014695          ZBTB3:  NM_001363108     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H17	ZBTB3
miRBase Accession/Entrez ID	MIMAT0014695	79842
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ZBTB3	chr11:62519032(-) A-I      3'UTR chr11:62518764(-) A-I      3'UTR chr11:62519082(-) A-I      3'UTR chr11:62518701(-) A-I      3'UTR chr11:62518790(-) A-I      3'UTR chr11:62518832(-) A-I      3'UTR chr11:62518927(-) A-I      3'UTR chr11:62519051(-) A-I      3'UTR chr11:62519062(-) A-I      3'UTR chr11:62519139(-) A-I      3'UTR chr11:62519307(-) A-I      3'UTR chr11:62519393(-) A-I      3'UTR chr11:62519295(-) A-I      3'UTR chr11:62518716(-) A-I      3'UTR chr11:62519135(-) A-I      3'UTR chr11:62518707(-) A-I      3'UTR chr11:62518710(-) A-I      3'UTR chr11:62519061(-) A-I      3'UTR chr11:62518670(-) A-I      3'UTR chr11:62518628(-) A-I      3'UTR chr11:62518656(-) A-I      3'UTR chr11:62518690(-) A-I      3'UTR chr11:62518693(-) A-I      3'UTR chr11:62519239(-) A-I      3'UTR chr11:62518831(-) A-I      3'UTR chr11:62519217(-) A-I      3'UTR chr11:62518616(-) A-I      3'UTR chr11:62518778(-) A-I      3'UTR chr11:62519491(-) A-I      3'UTR chr11:62519141(-) A-I      3'UTR chr11:62518908(-) A-I      3'UTR chr11:62518669(-) A-I      3'UTR chr11:62518918(-) A-I      3'UTR chr11:62518984(-) A-I      3'UTR chr11:62519285(-) A-I      3'UTR chr11:62519153(-) A-I      3'UTR chr11:62518819(-) A-I      3'UTR chr11:62519360(-) A-I      3'UTR chr11:62519242(-) A-I      3'UTR chr11:62518761(-) A-I      3'UTR chr11:62518751(-) A-I      3'UTR chr11:62519056(-) A-I      3'UTR chr11:62518643(-) A-I      3'UTR chr11:62518886(-) A-I      3'UTR chr11:62518911(-) A-I      3'UTR chr11:62518773(-) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ZBTB3	chr11:62518707(-) A-G exon 3'UTR    21725310 chr11:62519285(-) A-G exon 3'UTR    22484847 chr11:62519295(-) A-G exon 3'UTR    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ZBTB3	chr11:62518466-62518467(-) m6A 3'UTR//intron       27773535 chr11:62518554-62518555(-) m6A 3'UTR//intron       24284625//24981863//27773535 chr11:62519572-62519573(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr11:62519628-62519629(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr11:62519672-62519673(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085 chr11:62519690-62519691(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:62519709-62519710(-) m6A CDS       24284625//25456834//24981863//28052920//27773535//27371828//22575960//22608085 chr11:62519745-62519746(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085 chr11:62519848-62519849(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr11:62519860-62519861(-) m6A CDS       24284625//24209618//24981863//27773535//22575960//22608085 chr11:62519981-62519982(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr11:62520033-62520034(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085 chr11:62520074-62520075(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:62520090-62520091(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22575960//22608085 chr11:62520173-62520174(-) m6A CDS       24284625//25456834//24981863//27371828//22575960//22608085 chr11:62520190-62520191(-) m6A CDS       24284625//25456834//24981863//27371828//22608085 chr11:62520338-62520339(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr11:62520356-62520357(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22608085 chr11:62520441-62520442(-) m6A CDS       24284625//24981863//27773535//22608085 chr11:62520454-62520455(-) m6A CDS       24284625//24981863//27773535//22608085 chr11:62520652-62520653(-) m6A CDS       27773535//22608085 chr11:62520730-62520731(-) m6A CDS       24284625//22608085 chr11:62520753-62520754(-) m6A CDS       24284625//22608085 chr11:62520894-62520895(-) m6A CDS       24284625//25456834//24981863//22608085 chr11:62520960-62520961(-) m6A CDS       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ZBTB3	Chromatin K562 cells     - Cytoplasm Nasopharyngeal carcinoma cells     20498841 Exosome Blood     - Nucleus Nasopharyngeal carcinoma cells     20498841

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H17
Interactor2: ZBTB3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid
Support Database	RepTar//VmiReg