Basic Information:

  VIRBase ID:  

VHID00131787

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:  MIMAT0014695          EPS8L2:  NM_022772     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H17	EPS8L2
miRBase Accession/Entrez ID	MIMAT0014695	64787
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	DFNB106//EPS8R2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EPS8L2	chr11:717754(+) A-I      intronic chr11:710679(+) A-I      intronic chr11:710670(+) A-I      intronic chr11:717760(+) A-I      intronic chr11:711423(+) A-I      intronic chr11:718182(+) A-I      intronic chr11:718183(+) A-I      intronic chr11:711425(+) A-I      intronic chr11:717038(+) A-I      intronic chr11:711446(+) A-I      intronic chr11:710574(+) A-I      intronic chr11:710578(+) A-I      intronic chr11:710579(+) A-I      intronic chr11:718172(+) A-I      intronic chr11:716355(+) A-I      intronic chr11:711475(+) A-I      intronic chr11:711583(+) A-I      intronic chr11:718213(+) A-I      intronic chr11:718239(+) A-I      intronic chr11:718700(+) A-I      intronic chr11:718550(+) A-I      intronic chr11:717954(+) A-I      intronic chr11:710608(+) A-I      intronic chr11:719029(+) A-I      intronic chr11:718123(+) A-I      intronic chr11:711628(+) A-I      intronic chr11:711938(+) A-I      intronic chr11:718210(+) A-I      intronic chr11:715153(+) A-I      intronic chr11:715154(+) A-I      intronic chr11:716448(+) A-I      intronic chr11:717118(+) A-I      intronic chr11:710644(+) A-I      intronic chr11:717623(+) A-I      intronic chr11:717697(+) A-I      intronic chr11:718254(+) A-I      intronic chr11:718147(+) A-I      intronic chr11:717650(+) A-I      intronic chr11:718236(+) A-I      intronic chr11:718156(+) A-I      intronic chr11:718730(+) A-I      intronic chr11:711458(+) A-I      intronic chr11:716477(+) A-I      intronic chr11:718248(+) A-I      intronic chr11:718230(+) A-I      intronic chr11:718509(+) A-I      intronic chr11:712030(+) A-I      intronic chr11:717755(+) A-I      intronic chr11:717621(+) A-I      intronic chr11:711351(+) A-I      intronic chr11:718212(+) A-I      intronic chr11:717116(+) A-I      intronic chr11:718253(+) A-I      intronic chr11:718283(+) A-I      intronic chr11:712183(+) A-I      intronic chr11:716288(+) A-I      intronic chr11:713720(+) A-I      intronic chr11:718546(+) A-I      intronic chr11:718078(+) A-I      intronic chr11:713595(+) A-I      intronic chr11:717089(+) A-I      intronic chr11:716457(+) A-I      intronic chr11:710636(+) A-I      intronic chr11:712165(+) A-I      intronic chr11:717677(+) A-I      intronic chr11:712491(+) A-I      intronic chr11:713686(+) A-I      intronic chr11:713718(+) A-I      intronic chr11:711615(+) A-I      intronic chr11:718119(+) A-I      intronic chr11:718585(+) A-I      intronic chr11:718186(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EPS8L2	chr11:718212(+) A-I intron -    21960545 chr11:718213(+) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EPS8L2	chr11:695671-695672(+) m6A intron       25456834//24981863 chr11:700895-700896(+) m6A intron       22608085 chr11:700926-700927(+) m6A intron       22608085 chr11:703156-703157(+) m6A intron       22608085 chr11:703232-703233(+) m6A intron       24284625//25456834//24981863//22608085 chr11:703324-703325(+) m6A intron       25456834//24981863//22608085 chr11:703353-703354(+) m6A intron       25456834//24981863//22608085 chr11:703374-703375(+) m6A intron       25456834//22608085 chr11:703379-703380(+) m6A intron       25456834//22608085 chr11:703384-703385(+) m6A intron       25456834//22608085 chr11:703712-703713(+) m6A intron       24981863//22608085 chr11:703741-703742(+) m6A intron       24981863//22608085 chr11:703839-703840(+) m6A intron       22608085 chr11:704831-704832(+) m6A intron       - chr11:705235-705236(+) m6A 5'UTR//intron       24981863 chr11:706203-706204(+) m6A 5'UTR//exon       24981863 chr11:706228-706229(+) m6A 5'UTR//exon       24284625//24981863 chr11:706259-706260(+) m6A 5'UTR//exon       24284625//24981863 chr11:706677-706678(+) m6A 5'UTR//exon//intron       24284625//24981863 chr11:706775-706776(+) m6A 5'UTR//exon//intron       24981863 chr11:709336-709337(+) m6A 5'UTR//exon       24981863 chr11:709353-709354(+) m6A 5'UTR//exon       24981863 chr11:709402-709403(+) m6A 5'UTR//exon       24284625//24981863//22575960 chr11:709599-709600(+) m6A CDS//exon       24284625//24981863//22575960 chr11:709674-709675(+) m6A 3'UTR//exon//intron       24284625 chr11:710465-710466(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr11:720083-720084(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr11:720160-720161(+) m6A 3'UTR//CDS//exon       24284625//22575960 chr11:720209-720210(+) m6A 3'UTR//CDS//exon       24284625 chr11:720214-720215(+) Gm 3'UTR//CDS//exon       - chr11:720557-720558(+) m6A CDS//exon//intron       24284625 chr11:720693-720694(+) m6A 3'UTR//CDS//exon       22575960 chr11:720848-720849(+) m6A 3'UTR//CDS//exon       22575960 chr11:720901-720902(+) m6A 3'UTR//CDS//exon       24284625 chr11:721046-721047(+) m6A exon//intron       24284625 chr11:721066-721067(+) m6A 3'UTR//CDS//exon       24284625 chr11:721646-721647(+) m6A 3'UTR//CDS//exon       - chr11:721666-721667(+) m1A 3'UTR//CDS//exon       26863196 chr11:721700-721701(+) m6A exon//intron       - chr11:721750-721751(+) m6A exon//intron       - chr11:721774-721775(+) m6A exon//intron       - chr11:723271-723272(+) m6A 3'UTR//CDS//exon       24284625 chr11:724609-724610(+) m6A exon//intron       24284625 chr11:724681-724682(+) m6A exon//intron       - chr11:724692-724693(+) m6A exon//intron       - chr11:726161-726162(+) m6A 3'UTR//CDS//exon       24284625//24981863//22575960 chr11:726629-726630(+) m6A 3'UTR//CDS//exon       - chr11:726929-726930(+) m6A 3'UTR//CDS//exon//intron       24981863 chr11:726937-726938(+) m6A 3'UTR//CDS//exon//intron       24981863 chr11:726973-726974(+) m6A 3'UTR//CDS//exon//intron       24981863 chr11:727074-727075(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//26404942 chr11:727147-727148(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//26404942//22575960 chr11:727177-727178(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863//26404942 chr11:727192-727193(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863 chr11:727245-727246(+) m6A 3'UTR//exon//intron       24284625//24209618//24981863 chr11:727388-727389(+) m6A 3'UTR//exon       24284625//24209618//22575960 chr11:727521-727522(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960 chr11:727539-727540(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960 chr11:727571-727572(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960 chr11:727650-727651(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863 chr11:727707-727708(+) m6A 3'UTR//exon       24284625//25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EPS8L2	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleus HCC cell line (HepG2)     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H17
Interactor2: EPS8L2

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg