Basic Information:

  VIRBase ID:  

VHID00130508

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H17:  MIMAT0014695          KSR1:  NM_014238     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H17	KSR1
miRBase Accession/Entrez ID	MIMAT0014695	8844
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	KSR//RSU2

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KSR1	chr17:25933072(+) A-I      intronic chr17:25932401(+) A-I      intronic chr17:25933211(+) A-I      intronic chr17:25907967(+) A-I      intronic chr17:25907959(+) A-I      intronic chr17:25907897(+) A-I      intronic chr17:25877255(+) A-I      intronic chr17:25875742(+) A-I      intronic chr17:25875704(+) A-I      intronic chr17:25798079(+) A-I      intronic chr17:25798134(+) A-I      intronic chr17:25811522(+) A-I      intronic chr17:25814197(+) A-I      intronic chr17:25818450(+) A-I      intronic chr17:25818451(+) A-I      intronic chr17:25799673(+) A-I      intronic chr17:25799709(+) A-I      intronic chr17:25825100(+) A-I      intronic chr17:25825170(+) A-I      intronic chr17:25825180(+) A-I      intronic chr17:25807498(+) A-I      intronic chr17:25797920(+) A-I      intronic chr17:25834253(+) A-I      intronic chr17:25834309(+) A-I      intronic chr17:25834628(+) A-I      intronic chr17:25834781(+) A-I      intronic chr17:25804832(+) A-I      intronic chr17:25834862(+) A-I      intronic chr17:25834863(+) A-I      intronic chr17:25834875(+) A-I      intronic chr17:25836340(+) A-I      intronic chr17:25836583(+) A-I      intronic chr17:25836851(+) A-I      intronic chr17:25854293(+) A-I      intronic chr17:25799957(+) A-I      intronic chr17:25800055(+) A-I      intronic chr17:25804762(+) A-I      intronic chr17:25805036(+) A-I      intronic chr17:25854297(+) A-I      intronic chr17:25807504(+) A-I      intronic chr17:25807517(+) A-I      intronic chr17:25807523(+) A-I      intronic chr17:25807524(+) A-I      intronic chr17:25807553(+) A-I      intronic chr17:25807560(+) A-I      intronic chr17:25807659(+) A-I      intronic chr17:25809238(+) A-I      intronic chr17:25810502(+) A-I      intronic chr17:25854327(+) A-I      intronic chr17:25811362(+) A-I      intronic chr17:25854484(+) A-I      intronic chr17:25854485(+) A-I      intronic chr17:25855147(+) A-I      intronic chr17:25855219(+) A-I      intronic chr17:25855234(+) A-I      intronic chr17:25855302(+) A-I      intronic chr17:25874694(+) A-I      intronic chr17:25874767(+) A-I      intronic chr17:25875660(+) A-I      intronic chr17:25875679(+) A-I      intronic chr17:25875703(+) A-I      intronic chr17:25811423(+) A-I      intronic chr17:25788208(+) A-I      intronic chr17:25907910(+) A-I      intronic chr17:25798014(+) A-I      intronic chr17:25814341(+) A-I      intronic chr17:25815625(+) A-I      intronic chr17:25854288(+) A-I      intronic chr17:25855367(+) A-I      intronic chr17:25834368(+) A-I      intronic chr17:25839493(+) A-I      intronic chr17:25907918(+) A-I      intronic chr17:25854334(+) A-I      intronic chr17:25891278(+) A-I      intronic chr17:25825101(+) A-I      intronic chr17:25810437(+) A-I      intronic chr17:25907976(+) A-I      intronic chr17:25799708(+) A-I      intronic chr17:25814327(+) A-I      intronic chr17:25807443(+) A-I      intronic chr17:25834784(+) A-I      intronic chr17:25800047(+) A-I      intronic chr17:25810424(+) A-I      intronic chr17:25836745(+) A-I      intronic chr17:25791631(+) A-I      intronic chr17:25834659(+) A-I      intronic chr17:25818164(+) A-I      intronic chr17:25834206(+) A-I      intronic chr17:25875001(+) A-I      intronic chr17:25874941(+) A-I      intronic chr17:25834188(+) A-I      intronic chr17:25811397(+) A-I      intronic chr17:25907973(+) A-I      intronic chr17:25811357(+) A-I      intronic chr17:25907867(+) A-I      intronic chr17:25790295(+) A-I      intronic chr17:25818225(+) A-I      intronic chr17:25799994(+) A-I      intronic chr17:25844516(+) A-I      intronic chr17:25836577(+) A-I      intronic chr17:25894361(+) A-I      intronic chr17:25933207(+) A-I      intronic chr17:25907919(+) A-I      intronic chr17:25875806(+) A-I      intronic chr17:25854477(+) A-I      intronic chr17:25907993(+) A-I      intronic chr17:25814382(+) A-I      intronic chr17:25875700(+) A-I      intronic chr17:25855653(+) A-I      intronic chr17:25797928(+) A-I      intronic chr17:25834203(+) A-I      intronic chr17:25875698(+) A-I      intronic chr17:25800002(+) A-I      intronic chr17:25894353(+) A-I      intronic chr17:25799579(+) A-I      intronic chr17:25788161(+) A-I      intronic chr17:25799667(+) A-I      intronic chr17:25877089(+) A-I      intronic chr17:25799664(+) A-I      intronic chr17:25907935(+) A-I      intronic chr17:25933961(+) A-I      intronic chr17:25835856(+) A-I      intronic chr17:25854287(+) A-I      intronic chr17:25807563(+) A-I      intronic chr17:25933057(+) A-I      intronic chr17:25875775(+) A-I      intronic chr17:25933096(+) A-I      intronic chr17:25907873(+) A-I      intronic chr17:25810428(+) A-I      intronic chr17:25834720(+) A-I      intronic chr17:25836282(+) A-I      intronic chr17:25890494(+) A-I      intronic chr17:25811358(+) A-I      intronic chr17:25933051(+) A-I      intronic chr17:25798129(+) A-I      intronic chr17:25889106(+) A-I      intronic chr17:25834249(+) A-I      intronic chr17:25788316(+) A-I      intronic chr17:25807645(+) A-I      intronic chr17:25807541(+) A-I      intronic chr17:25834257(+) A-I      intronic chr17:25836791(+) A-I      intronic chr17:25855794(+) A-I      intronic chr17:25799961(+) A-I      intronic chr17:25797997(+) A-I      intronic chr17:25933141(+) A-I      intronic chr17:25800069(+) A-I      intronic chr17:25926345(+) A-I      intronic chr17:25933152(+) A-I      intronic chr17:25810493(+) A-I      intronic chr17:25854393(+) A-I      intronic chr17:25818425(+) A-I      intronic chr17:25836743(+) A-I      intronic chr17:25841416(+) A-I      intronic chr17:25891217(+) A-I      intronic chr17:25807610(+) A-I      intronic chr17:25907932(+) A-I      intronic chr17:25834844(+) A-I      intronic chr17:25836759(+) A-I      intronic chr17:25811361(+) A-I      intronic chr17:25811468(+) A-I      intronic chr17:25818251(+) A-I      intronic chr17:25854453(+) A-I      intronic chr17:25834703(+) A-I      intronic chr17:25818237(+) A-I      intronic chr17:25874936(+) A-I      intronic chr17:25834853(+) A-I      intronic chr17:25854305(+) A-I      intronic chr17:25834312(+) A-I      intronic chr17:25807442(+) A-I      intronic chr17:25797996(+) A-I      intronic chr17:25907893(+) A-I      intronic chr17:25841429(+) A-I      intronic chr17:25933932(+) A-I      intronic chr17:25834236(+) A-I      intronic chr17:25875649(+) A-I      intronic chr17:25862400(+) A-I      intronic chr17:25874719(+) A-I      intronic chr17:25795401(+) A-I      intronic chr17:25798115(+) A-I      intronic chr17:25836576(+) A-I      intronic chr17:25944734(+) A-I      intronic chr17:25807447(+) A-I      intronic chr17:25854509(+) A-I      intronic chr17:25907958(+) A-I      intronic chr17:25933962(+) A-I      intronic chr17:25798130(+) A-I      intronic chr17:25915285(+) A-I      intronic chr17:25794967(+) A-I      intronic chr17:25934110(+) A-I      intronic chr17:25874715(+) A-I      intronic chr17:25841430(+) A-I      intronic chr17:25949559(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KSR1	chr17:25885730(+) T-G intron -    22484847 chr17:25799961(+) A-G intron -    22484847 chr17:25810493(+) A-G intron -    22484847 chr17:25834659(+) A-G intron -    22484847 chr17:25854287(+) A-G intron -    22484847 chr17:25854288(+) A-G intron -    22484847 chr17:25906700(+) A-G intron -    22484847 chr17:25906782(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KSR1	chr17:25909689-25909690(+) m6A CDS//exon       - chr17:25909746-25909747(+) m6A CDS//exon       - chr17:25909860-25909861(+) m6A CDS//exon       - chr17:25909896-25909897(+) m6A CDS//exon       - chr17:25912913-25912914(+) m6A exon//intron       - chr17:25912985-25912986(+) m6A exon//intron       - chr17:25912999-25913000(+) m6A exon//intron       - chr17:25919562-25919563(+) m6A 3'UTR//CDS//exon       - chr17:25919581-25919582(+) m6A 3'UTR//CDS//exon       - chr17:25919599-25919600(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:25919612-25919613(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:25919625-25919626(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr17:25924321-25924322(+) m6A CDS//exon       24284625//25456834//24981863 chr17:25924441-25924442(+) m6A CDS//exon       24284625//25456834//24981863 chr17:25932573-25932574(+) m6A CDS//exon       - chr17:25932598-25932599(+) m6A CDS//exon       - chr17:25932724-25932725(+) m6A CDS       - chr17:25932757-25932758(+) m6A CDS       - chr17:25932811-25932812(+) m6A CDS       - chr17:25934977-25934978(+) m6A CDS       - chr17:25934995-25934996(+) m6A CDS       - chr17:25949128-25949129(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr17:25949244-25949245(+) m6A 3'UTR//intron       24284625//25456834//24981863 chr17:25949540-25949541(+) Tm 3'UTR//intron       - chr17:25949656-25949657(+) m6A 3'UTR//intron       - chr17:25949674-25949675(+) m6A 3'UTR//intron       - chr17:25950473-25950474(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950501-25950502(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950524-25950525(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950550-25950551(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950564-25950565(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950625-25950626(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950639-25950640(+) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//22608085 chr17:25950675-25950676(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr17:25950706-25950707(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr17:25950770-25950771(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr17:25950789-25950790(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr17:25950812-25950813(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr17:25950894-25950895(+) m6A 3'UTR       24284625//24209618//25456834//22608085 chr17:25952063-25952064(+) m6A 3'UTR       24284625 chr17:25952108-25952109(+) m6A 3'UTR       24284625 chr17:25952496-25952497(+) m6A 3'UTR       24284625//25456834 chr17:25952532-25952533(+) m6A 3'UTR       24284625//25456834//24981863 chr17:25952562-25952563(+) m6A 3'UTR       24284625//25456834//24981863 chr17:25952570-25952571(+) m6A 3'UTR       24284625//25456834//24981863 chr17:25952624-25952625(+) m6A 3'UTR       24284625//25456834//24981863 chr17:25952684-25952685(+) Gm 3'UTR       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KSR1	Chromatin K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H17
Interactor2: KSR1

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg