Basic Information:

  VIRBase ID:  

VHID00127783

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          DIXDC1:  NM_001037954     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	DIXDC1
miRBase Accession/Entrez ID	MIMAT0014694	85458
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CCD1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	DIXDC1	chr11:111858643(+) A-I      intronic chr11:111867424(+) A-I      intronic chr11:111867453(+) A-I      intronic chr11:111886254(+) A-I      intronic chr11:111886292(+) A-I      intronic chr11:111886270(+) A-I      intronic chr11:111886311(+) A-I      intronic chr11:111858642(+) A-I      intronic chr11:111867494(+) A-I      intronic chr11:111868189(+) A-I      intronic chr11:111858888(+) A-I      intronic chr11:111841275(+) A-I      intronic chr11:111822643(+) A-I      intronic chr11:111873305(+) A-I      intronic chr11:111870774(+) A-I      intronic chr11:111870709(+) A-I      intronic chr11:111817332(+) A-I      intronic chr11:111870437(+) A-I      intronic chr11:111870428(+) A-I      intronic chr11:111886279(+) A-I      intronic chr11:111873259(+) A-I      intronic chr11:111870438(+) A-I      intronic chr11:111870427(+) A-I      intronic chr11:111827799(+) A-I      intronic chr11:111824255(+) A-I      intronic chr11:111870393(+) A-I      intronic chr11:111824165(+) A-I      intronic chr11:111858835(+) A-I      intronic chr11:111870350(+) A-I      intronic chr11:111870317(+) A-I      intronic chr11:111869447(+) A-I      intronic chr11:111858852(+) A-I      intronic chr11:111869438(+) A-I      intronic chr11:111873445(+) A-I      intronic chr11:111869367(+) A-I      intronic chr11:111868226(+) A-I      intronic chr11:111855163(+) A-I      intronic chr11:111874173(+) A-I      intronic chr11:111868215(+) A-I      intronic chr11:111885789(+) A-I      intronic chr11:111868134(+) A-I      intronic chr11:111867481(+) A-I      intronic chr11:111867355(+) A-I      intronic chr11:111858969(+) A-I      intronic chr11:111870369(+) A-I      intronic chr11:111870413(+) A-I      intronic chr11:111868240(+) A-I      intronic chr11:111873446(+) A-I      intronic chr11:111858889(+) A-I      intronic chr11:111858755(+) A-I      intronic chr11:111872647(+) A-I      intronic chr11:111868160(+) A-I      intronic chr11:111858743(+) A-I      intronic chr11:111857797(+) A-I      intronic chr11:111824151(+) A-I      intronic chr11:111858403(+) A-I      intronic chr11:111857883(+) A-I      intronic chr11:111870333(+) A-I      intronic chr11:111857880(+) A-I      intronic chr11:111857863(+) A-I      intronic chr11:111857859(+) A-I      intronic chr11:111870568(+) A-I      intronic chr11:111855151(+) A-I      intronic chr11:111867489(+) A-I      intronic chr11:111857853(+) A-I      intronic chr11:111827476(+) A-I      intronic chr11:111823397(+) A-I      intronic chr11:111886370(+) A-I      intronic chr11:111823389(+) A-I      intronic chr11:111823450(+) A-I      intronic chr11:111840873(+) A-I      intronic chr11:111867561(+) A-I      intronic chr11:111823433(+) A-I      intronic chr11:111844071(+) A-I      intronic chr11:111817353(+) A-I      intronic chr11:111857827(+) A-I      intronic chr11:111870442(+) A-I      intronic chr11:111886709(+) A-I      intronic chr11:111817347(+) A-I      intronic chr11:111817337(+) A-I      intronic chr11:111840954(+) A-I      intronic chr11:111870504(+) A-I      intronic chr11:111822683(+) A-I      intronic chr11:111814476(+) A-I      intronic chr11:111886361(+) A-I      intronic chr11:111867414(+) A-I      intronic chr11:111870524(+) A-I      intronic chr11:111870403(+) A-I      intronic chr11:111886732(+) A-I      intronic chr11:111827232(+) A-I      intronic chr11:111869397(+) A-I      intronic chr11:111867427(+) A-I      intronic chr11:111867418(+) A-I      intronic chr11:111867499(+) A-I      intronic chr11:111868199(+) A-I      intronic chr11:111871167(+) A-I      intronic chr11:111860954(+) A-I      intronic chr11:111861015(+) A-I      intronic chr11:111869424(+) A-I      intronic chr11:111858644(+) A-I      intronic chr11:111830733(+) A-I      intronic chr11:111885806(+) A-I      intronic chr11:111886276(+) A-I      intronic chr11:111870804(+) A-I      intronic chr11:111874402(+) A-I      intronic chr11:111823254(+) A-I      intronic chr11:111840909(+) A-I      intronic chr11:111885883(+) A-I      intronic chr11:111857269(+) A-I      intronic chr11:111885792(+) A-I      intronic chr11:111869289(+) A-I      intronic chr11:111871168(+) A-I      intronic chr11:111886277(+) A-I      intronic chr11:111867495(+) A-I      intronic chr11:111871259(+) A-I      intronic chr11:111873350(+) A-I      intronic chr11:111869368(+) A-I      intronic chr11:111860788(+) A-I      intronic chr11:111870699(+) A-I      intronic chr11:111858996(+) A-I      intronic chr11:111857957(+) A-I      intronic chr11:111874361(+) A-I      intronic chr11:111864591(+) A-I      intronic chr11:111886324(+) A-I      intronic chr11:111870700(+) A-I      intronic chr11:111827804(+) A-I      intronic chr11:111830727(+) A-I      intronic chr11:111858983(+) A-I      intronic chr11:111818648(+) A-I      intronic chr11:111839953(+) A-I      intronic chr11:111868209(+) A-I      intronic chr11:111873432(+) A-I      intronic chr11:111885640(+) A-I      intronic chr11:111844059(+) A-I      intronic chr11:111886285(+) A-I      intronic chr11:111873405(+) A-I      intronic chr11:111823423(+) A-I      intronic chr11:111870435(+) A-I      intronic chr11:111869291(+) A-I      intronic chr11:111867415(+) A-I      intronic chr11:111858564(+) A-I      intronic chr11:111841053(+) A-I      intronic chr11:111886347(+) A-I      intronic chr11:111825618(+) A-I      intronic chr11:111870429(+) A-I      intronic chr11:111886306(+) A-I      intronic chr11:111839708(+) A-I      intronic chr11:111868225(+) A-I      intronic chr11:111872755(+) A-I      intronic chr11:111857845(+) A-I      intronic chr11:111860995(+) A-I      intronic chr11:111831239(+) A-I      intronic chr11:111830734(+) A-I      intronic chr11:111868245(+) A-I      intronic chr11:111885877(+) A-I      intronic chr11:111841300(+) A-I      intronic chr11:111873308(+) A-I      intronic chr11:111885775(+) A-I      intronic chr11:111868164(+) A-I      intronic chr11:111870768(+) A-I      intronic chr11:111861614(+) A-I      intronic chr11:111874362(+) A-I      intronic chr11:111821442(+) A-I      intronic chr11:111886325(+) A-I      intronic chr11:111870501(+) A-I      intronic chr11:111861089(+) A-I      intronic chr11:111857937(+) A-I      intronic chr11:111870334(+) A-I      intronic chr11:111870771(+) A-I      intronic chr11:111873420(+) A-I      intronic chr11:111868163(+) A-I      intronic chr11:111857812(+) A-I      intronic chr11:111858656(+) A-I      intronic chr11:111826011(+) A-I      intronic chr11:111860094(+) A-I      intronic chr11:111869423(+) A-I      intronic chr11:111871161(+) A-I      intronic chr11:111827231(+) A-I      intronic chr11:111840906(+) A-I      intronic chr11:111825553(+) A-I      intronic chr11:111868140(+) A-I      intronic chr11:111873501(+) A-I      intronic chr11:111867431(+) A-I      intronic chr11:111800222(+) A-I      intronic chr11:111892678(+) A-I      3'UTR

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	DIXDC1	chr11:111840906(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	DIXDC1	chr11:111808193-111808194(+) m6A 5'UTR//exon//intron       24981863 chr11:111808220-111808221(+) m6A 5'UTR//exon//intron       24981863 chr11:111848069-111848070(+) m6A 5'UTR//intron       25456834 chr11:111851565-111851566(+) m6A 5'UTR//CDS       24981863 chr11:111851570-111851571(+) m6A 5'UTR//CDS       24981863 chr11:111852952-111852953(+) m6A exon//intron       24981863 chr11:111852978-111852979(+) m6A exon//intron       24981863 chr11:111853204-111853205(+) m6A CDS//exon       24981863 chr11:111863169-111863170(+) m6A CDS//exon       24981863 chr11:111863191-111863192(+) m6A CDS//exon       24981863 chr11:111863217-111863218(+) m6A CDS//exon       24981863 chr11:111863705-111863706(+) m6A CDS//exon       24981863 chr11:111889743-111889744(+) m6A CDS//exon       24284625//24981863//22575960 chr11:111889789-111889790(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085 chr11:111889827-111889828(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085 chr11:111889833-111889834(+) m6A 3'UTR//exon       24284625//24209618//24981863//22575960//22608085 chr11:111889872-111889873(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111889960-111889961(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111889995-111889996(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890021-111890022(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890028-111890029(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890193-111890194(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890228-111890229(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890239-111890240(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890282-111890283(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890300-111890301(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890374-111890375(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890390-111890391(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890483-111890484(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr11:111890518-111890519(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr11:111890526-111890527(+) m6A 3'UTR//exon       24284625//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	DIXDC1	Exosome Blood     - Membrane HCC cell line (HepG2)     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: DIXDC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg