Basic Information:

  VIRBase ID:  

VHID00126973

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          EPS15L1:  NR_047665     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	EPS15L1
miRBase Accession/Entrez ID	MIMAT0014694	58513
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	EPS15R

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	EPS15L1	chr19:16522643(-) A-I      intronic chr19:16544035(-) A-I      intronic chr19:16544036(-) A-I      intronic chr19:16544044(-) A-I      intronic chr19:16544050(-) A-I      intronic chr19:16544069(-) A-I      intronic chr19:16549497(-) A-I      intronic chr19:16564088(-) A-I      intronic chr19:16564112(-) A-I      intronic chr19:16564115(-) A-I      intronic chr19:16564116(-) A-I      intronic chr19:16507233(-) A-I      intronic chr19:16507240(-) A-I      intronic chr19:16507241(-) A-I      intronic chr19:16507242(-) A-I      intronic chr19:16507274(-) A-I      intronic chr19:16564120(-) A-I      intronic chr19:16507276(-) A-I      intronic chr19:16507278(-) A-I      intronic chr19:16507291(-) A-I      intronic chr19:16507292(-) A-I      intronic chr19:16507299(-) A-I      intronic chr19:16522626(-) A-I      intronic chr19:16506498(-) A-I      intronic chr19:16522635(-) A-I      intronic chr19:16506704(-) A-I      intronic chr19:16522639(-) A-I      intronic chr19:16541659(-) A-I      intronic chr19:16518214(-) A-I      intronic chr19:16518225(-) A-I      intronic chr19:16518391(-) A-I      intronic chr19:16518412(-) A-I      intronic chr19:16519402(-) A-I      intronic chr19:16519408(-) A-I      intronic chr19:16522649(-) A-I      intronic chr19:16522665(-) A-I      intronic chr19:16522709(-) A-I      intronic chr19:16522713(-) A-I      intronic chr19:16522777(-) A-I      intronic chr19:16523309(-) A-I      intronic chr19:16523377(-) A-I      intronic chr19:16523378(-) A-I      intronic chr19:16523403(-) A-I      intronic chr19:16523410(-) A-I      intronic chr19:16527516(-) A-I      intronic chr19:16527525(-) A-I      intronic chr19:16527535(-) A-I      intronic chr19:16527584(-) A-I      intronic chr19:16534114(-) A-I      intronic chr19:16534133(-) A-I      intronic chr19:16534269(-) A-I      intronic chr19:16534281(-) A-I      intronic chr19:16534313(-) A-I      intronic chr19:16535365(-) A-I      intronic chr19:16535377(-) A-I      intronic chr19:16535583(-) A-I      intronic chr19:16535745(-) A-I      intronic chr19:16541878(-) A-I      intronic chr19:16541895(-) A-I      intronic chr19:16542297(-) A-I      intronic chr19:16542342(-) A-I      intronic chr19:16542380(-) A-I      intronic chr19:16542385(-) A-I      intronic chr19:16542988(-) A-I      intronic chr19:16543019(-) A-I      intronic chr19:16543048(-) A-I      intronic chr19:16543081(-) A-I      intronic chr19:16543136(-) A-I      intronic chr19:16543190(-) A-I      intronic chr19:16543195(-) A-I      intronic chr19:16543455(-) A-I      intronic chr19:16543471(-) A-I      intronic chr19:16543507(-) A-I      intronic chr19:16543519(-) A-I      intronic chr19:16543687(-) A-I      intronic chr19:16543689(-) A-I      intronic chr19:16543702(-) A-I      intronic chr19:16543754(-) A-I      intronic chr19:16543780(-) A-I      intronic chr19:16543785(-) A-I      intronic chr19:16543894(-) A-I      intronic chr19:16544076(-) A-I      intronic chr19:16544099(-) A-I      intronic chr19:16544103(-) A-I      intronic chr19:16544533(-) A-I      intronic chr19:16544674(-) A-I      intronic chr19:16544691(-) A-I      intronic chr19:16548981(-) A-I      intronic chr19:16548991(-) A-I      intronic chr19:16548995(-) A-I      intronic chr19:16549001(-) A-I      intronic chr19:16549452(-) A-I      intronic chr19:16549469(-) A-I      intronic chr19:16549495(-) A-I      intronic chr19:16549524(-) A-I      intronic chr19:16549525(-) A-I      intronic chr19:16549542(-) A-I      intronic chr19:16549566(-) A-I      intronic chr19:16549582(-) A-I      intronic chr19:16550419(-) A-I      intronic chr19:16554763(-) A-I      intronic chr19:16554812(-) A-I      intronic chr19:16560930(-) A-I      intronic chr19:16560946(-) A-I      intronic chr19:16561014(-) A-I      intronic chr19:16561352(-) A-I      intronic chr19:16561394(-) A-I      intronic chr19:16561430(-) A-I      intronic chr19:16561819(-) A-I      intronic chr19:16561822(-) A-I      intronic chr19:16561829(-) A-I      intronic chr19:16562405(-) A-I      intronic chr19:16562613(-) A-I      intronic chr19:16562692(-) A-I      intronic chr19:16562698(-) A-I      intronic chr19:16563194(-) A-I      intronic chr19:16564022(-) A-I      intronic chr19:16564051(-) A-I      intronic chr19:16564119(-) A-I      intronic chr19:16564191(-) A-I      intronic chr19:16565828(-) A-I      intronic chr19:16565893(-) A-I      intronic chr19:16566187(-) A-I      intronic chr19:16567006(-) A-I      intronic chr19:16576847(-) A-I      intronic chr19:16576857(-) A-I      intronic chr19:16576908(-) A-I      intronic chr19:16576938(-) A-I      intronic chr19:16576977(-) A-I      intronic chr19:16576978(-) A-I      intronic chr19:16576981(-) A-I      intronic chr19:16577479(-) A-I      intronic chr19:16577496(-) A-I      intronic chr19:16577602(-) A-I      intronic chr19:16577614(-) A-I      intronic chr19:16578052(-) A-I      intronic chr19:16578155(-) A-I      intronic chr19:16578156(-) A-I      intronic chr19:16578193(-) A-I      intronic chr19:16578207(-) A-I      intronic chr19:16579601(-) A-I      intronic chr19:16579602(-) A-I      intronic chr19:16579606(-) A-I      intronic chr19:16579612(-) A-I      intronic chr19:16579627(-) A-I      intronic chr19:16579745(-) A-I      intronic chr19:16579763(-) A-I      intronic chr19:16578233(-) A-I      intronic chr19:16473408(-) A-I      intronic chr19:16473524(-) A-I      intronic chr19:16473534(-) A-I      intronic chr19:16498233(-) A-I      intronic chr19:16498248(-) A-I      intronic chr19:16498254(-) A-I      intronic chr19:16498294(-) A-I      intronic chr19:16498335(-) A-I      intronic chr19:16498449(-) A-I      intronic chr19:16498453(-) A-I      intronic chr19:16498455(-) A-I      intronic chr19:16498992(-) A-I      intronic chr19:16505814(-) A-I      intronic chr19:16505826(-) A-I      intronic chr19:16505972(-) A-I      intronic chr19:16506450(-) A-I      intronic chr19:16506511(-) A-I      intronic chr19:16506512(-) A-I      intronic chr19:16506538(-) A-I      intronic chr19:16506575(-) A-I      intronic chr19:16506583(-) A-I      intronic chr19:16506589(-) A-I      intronic chr19:16506607(-) A-I      intronic chr19:16506608(-) A-I      intronic chr19:16506644(-) A-I      intronic chr19:16506648(-) A-I      intronic chr19:16506673(-) A-I      intronic chr19:16506674(-) A-I      intronic chr19:16506693(-) A-I      intronic chr19:16506807(-) A-I      intronic chr19:16506810(-) A-I      intronic chr19:16506811(-) A-I      intronic chr19:16506819(-) A-I      intronic chr19:16506823(-) A-I      intronic chr19:16506836(-) A-I      intronic chr19:16506855(-) A-I      intronic chr19:16507084(-) A-I      intronic chr19:16507149(-) A-I      intronic chr19:16507170(-) A-I      intronic chr19:16507246(-) A-I      intronic chr19:16507248(-) A-I      intronic chr19:16507249(-) A-I      intronic chr19:16507252(-) A-I      intronic chr19:16507294(-) A-I      intronic chr19:16507339(-) A-I      intronic chr19:16507350(-) A-I      intronic chr19:16507953(-) A-I      intronic chr19:16507968(-) A-I      intronic chr19:16507997(-) A-I      intronic chr19:16508119(-) A-I      intronic chr19:16508157(-) A-I      intronic chr19:16508173(-) A-I      intronic chr19:16510891(-) A-I      intronic chr19:16510912(-) A-I      intronic chr19:16510931(-) A-I      intronic chr19:16510968(-) A-I      intronic chr19:16510982(-) A-I      intronic chr19:16511033(-) A-I      intronic chr19:16511085(-) A-I      intronic chr19:16473610(-) A-I      intronic chr19:16555776(-) A-I      intronic chr19:16555573(-) A-I      intronic chr19:16555666(-) A-I      intronic chr19:16549465(-) A-I      intronic chr19:16507175(-) A-I      intronic chr19:16555694(-) A-I      intronic chr19:16555630(-) A-I      intronic chr19:16549605(-) A-I      intronic chr19:16555682(-) A-I      intronic chr19:16566188(-) A-I      intronic chr19:16523211(-) A-I      intronic chr19:16534189(-) A-I      intronic chr19:16560976(-) A-I      intronic chr19:16560934(-) A-I      intronic chr19:16563216(-) A-I      intronic chr19:16555711(-) A-I      intronic chr19:16564027(-) A-I      intronic chr19:16555686(-) A-I      intronic chr19:16555670(-) A-I      intronic chr19:16507141(-) A-I      intronic chr19:16555781(-) A-I      intronic chr19:16565706(-) A-I      intronic chr19:16555613(-) A-I      intronic chr19:16555676(-) A-I      intronic chr19:16562504(-) A-I      intronic chr19:16555779(-) A-I      intronic chr19:16555568(-) A-I      intronic chr19:16507963(-) A-I      intronic chr19:16564195(-) A-I      intronic chr19:16542341(-) A-I      intronic chr19:16506866(-) A-I      intronic chr19:16549056(-) A-I      intronic chr19:16511036(-) A-I      intronic chr19:16565832(-) A-I      intronic chr19:16565863(-) A-I      intronic chr19:16511026(-) A-I      intronic chr19:16562936(-) A-I      intronic chr19:16560972(-) A-I      intronic chr19:16507244(-) A-I      intronic chr19:16560936(-) A-I      intronic chr19:16542994(-) A-I      intronic chr19:16562510(-) A-I      intronic chr19:16506861(-) A-I      intronic chr19:16575702(-) A-I      intronic chr19:16577631(-) A-I      intronic chr19:16506797(-) A-I      intronic chr19:16508089(-) A-I      intronic chr19:16507211(-) A-I      intronic chr19:16564009(-) A-I      intronic chr19:16564003(-) A-I      intronic chr19:16564075(-) A-I      intronic chr19:16560958(-) A-I      intronic chr19:16565857(-) A-I      intronic chr19:16562838(-) A-I      intronic chr19:16564055(-) A-I      intronic chr19:16566053(-) A-I      intronic chr19:16519354(-) A-I      intronic chr19:16560971(-) A-I      intronic chr19:16549081(-) A-I      intronic chr19:16507213(-) A-I      intronic chr19:16564183(-) A-I      intronic chr19:16507146(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	EPS15L1	chr19:16507146(-) A-I intron -    22327324 chr19:16507361(-) A-I intron -    22327324 chr19:16555568(-) A-I intron -    22028664 chr19:16555573(-) A-I intron -    22028664 chr19:16555613(-) A-I intron -    22028664 chr19:16555630(-) A-I intron -    22028664 chr19:16555666(-) A-I intron -    22028664 chr19:16555670(-) A-I intron -    22028664 chr19:16555676(-) A-I intron -    22028664 chr19:16555682(-) A-I intron -    22028664 chr19:16555686(-) A-I intron -    22028664 chr19:16555694(-) A-I intron -    22028664 chr19:16555711(-) A-I intron -    22028664 chr19:16555776(-) A-I intron -    22028664 chr19:16555779(-) A-I intron -    22028664 chr19:16555781(-) A-I intron -    22028664 chr19:16507248(-) A-I intron -    21960545

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	EPS15L1	chr19:16466166-16466167(-) m6A 3'UTR       27773535 chr19:16466236-16466237(-) m6A 3'UTR       25456834//27773535//27371828 chr19:16466363-16466364(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536 chr19:16466376-16466377(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536 chr19:16466403-16466404(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr19:16466409-16466410(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//27773536//22608085 chr19:16466492-16466493(-) m6A 3'UTR       24284625//25456834//24981863//27371828//27773536 chr19:16466557-16466558(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536 chr19:16466564-16466565(-) m6A 3'UTR//CDS       24284625//24209618//25456834//24981863//27371828//27773536 chr19:16466605-16466606(-) m6A 3'UTR//CDS       24209618//25456834//24981863//27371828//27773536 chr19:16468859-16468860(-) m6A intron       - chr19:16468912-16468913(-) m6A intron       - chr19:16468994-16468995(-) m6A intron       - chr19:16469000-16469001(-) m6A intron       - chr19:16469029-16469030(-) m6A intron       - chr19:16469055-16469056(-) m6A intron       - chr19:16472419-16472420(-) m6A 3'UTR//intron       27773535 chr19:16472504-16472505(-) m6A 3'UTR//intron       27773535 chr19:16472758-16472759(-) m6A 3'UTR//CDS       27773535 chr19:16487942-16487943(-) m6A 3'UTR//CDS//intron       27773535 chr19:16487963-16487964(-) m6A 3'UTR//CDS//intron       27773535 chr19:16487988-16487989(-) m6A 3'UTR//CDS//intron       27773535 chr19:16487993-16487994(-) m6A 3'UTR//CDS//intron       27773535 chr19:16493839-16493840(-) m6A 3'UTR//intron       27773535 chr19:16503177-16503178(-) m6A 3'UTR//CDS       27773535 chr19:16503235-16503236(-) m6A 3'UTR//CDS       27773535 chr19:16504773-16504774(-) m6A 3'UTR//CDS       27773535 chr19:16504780-16504781(-) m6A 3'UTR//CDS       27773535 chr19:16506198-16506199(-) m6A 3'UTR//CDS       27773535 chr19:16506205-16506206(-) m6A 3'UTR//CDS       27773535 chr19:16512746-16512747(-) m6A 3'UTR//intron       - chr19:16512777-16512778(-) m6A 3'UTR//intron       - chr19:16513284-16513285(-) m6A 3'UTR//CDS       27773535//27371828//27773536 chr19:16514587-16514588(-) m6A 3'UTR//CDS       24981863//27773535//27371828//27773536 chr19:16514632-16514633(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16514652-16514653(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16514673-16514674(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16515406-16515407(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16515444-16515445(-) m6A 3'UTR//CDS       24981863//27773535//27371828//27773536 chr19:16515468-16515469(-) m6A 3'UTR//CDS       24981863//27773535//27371828//27773536 chr19:16515486-16515487(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16515500-16515501(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16515532-16515533(-) m6A 3'UTR//CDS       24981863//27773535//27371828//27773536 chr19:16515540-16515541(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16524597-16524598(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16524604-16524605(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828//27773536 chr19:16524632-16524633(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828 chr19:16524637-16524638(-) m6A 3'UTR//CDS       24981863//28052920//27773535//27371828 chr19:16528316-16528317(-) m6A exon//intron       27773535 chr19:16532147-16532148(-) m6A 3'UTR//CDS//exon       27773535 chr19:16532213-16532214(-) m6A 3'UTR//CDS//exon       27773535 chr19:16532223-16532224(-) m6A 3'UTR//CDS//exon       27773535 chr19:16532276-16532277(-) m6A 3'UTR//CDS       27773536 chr19:16535898-16535899(-) m6A 3'UTR//CDS       27773536 chr19:16535984-16535985(-) m6A 3'UTR//CDS       24284625//27773535//27371828//27773536 chr19:16536036-16536037(-) m6A 3'UTR//CDS       24284625//27371828//27773536 chr19:16539564-16539565(-) m6A 3'UTR//CDS       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	EPS15L1	Chromatin K562 cells     - Cytosol HeLa-S3 cells     - Exosome Blood     - Insoluble cytoplasm HCC cell line (HepG2)     - Membrane HCC cell line (HepG2)     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: EPS15L1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg