Basic Information:

  VIRBase ID:  

VHID00125379

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          COPS8:  NM_006710     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	COPS8
miRBase Accession/Entrez ID	MIMAT0014694	10920
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	COP9//CSN8//SGN8

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	COPS8	chr2:237994478-237994479(+) m6A 5'UTR       - chr2:237994554-237994555(+) m6A 5'UTR//exon       24981863 chr2:237994671-237994672(+) m6A 5'UTR//CDS//exon       24981863 chr2:238006770-238006771(+) m6A 3'UTR//exon//intron       - chr2:238006840-238006841(+) m6A 3'UTR//intron       - chr2:238006895-238006896(+) m6A 3'UTR//intron       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	COPS8	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleus HeLa-S3 cells|K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: COPS8

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//Targetscan
Support Database	RepTar//VmiReg