Basic Information:

  VIRBase ID:  

VHID00124386

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          SYPL1:  NR_167730     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	SYPL1
miRBase Accession/Entrez ID	MIMAT0014694	6856
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	H-SP1//SYPL

RNA Editing:

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	SYPL1	chr7:105735796(-) A-I intron -    21960545 chr7:105746823(-) T-C intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SYPL1	chr7:105732132-105732133(-) Y 3'UTR       26075521 chr7:105733472-105733473(-) m6A 3'UTR//CDS//exon       26404942 chr7:105753005-105753006(-) m6A 5'UTR//exon       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SYPL1	Chromatin K562 cells     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus K562 cells     - Ribosome HEK-293 cells     22199352 Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: SYPL1

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid
Support Database	VmiReg