Basic Information:

  VIRBase ID:  

VHID00123833

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          NDUFA7:  NR_135539     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	NDUFA7
miRBase Accession/Entrez ID	MIMAT0014694	4701
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	B14.5a//CI-B14.5a

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	NDUFA7	chr19:8377502(-) A-I      intronic chr19:8377497(-) A-I      intronic chr19:8377463(-) A-I      intronic chr19:8377462(-) A-I      intronic chr19:8377436(-) A-I      intronic chr19:8382640(-) A-I      intronic chr19:8384899(-) A-I      intronic chr19:8384763(-) A-I      intronic chr19:8383506(-) A-I      intronic chr19:8383395(-) A-I      intronic chr19:8383366(-) A-I      intronic chr19:8383267(-) A-I      intronic chr19:8383228(-) A-I      intronic chr19:8383227(-) A-I      intronic chr19:8383222(-) A-I      intronic chr19:8383209(-) A-I      intronic chr19:8383207(-) A-I      intronic chr19:8383017(-) A-I      intronic chr19:8383016(-) A-I      intronic chr19:8382838(-) A-I      intronic chr19:8382391(-) A-I      intronic chr19:8382301(-) A-I      intronic chr19:8382225(-) A-I      intronic chr19:8381170(-) A-I      intronic chr19:8381147(-) A-I      intronic chr19:8380964(-) A-I      intronic chr19:8380950(-) A-I      intronic chr19:8380854(-) A-I      intronic chr19:8380788(-) A-I      intronic chr19:8379697(-) A-I      intronic chr19:8379681(-) A-I      intronic chr19:8379675(-) A-I      intronic chr19:8379672(-) A-I      intronic chr19:8379616(-) A-I      intronic chr19:8379553(-) A-I      intronic chr19:8378319(-) A-I      intronic chr19:8378286(-) A-I      intronic chr19:8378253(-) A-I      intronic chr19:8378060(-) A-I      intronic chr19:8377722(-) A-I      intronic chr19:8377718(-) A-I      intronic chr19:8377717(-) A-I      intronic chr19:8377716(-) A-I      intronic chr19:8377687(-) A-I      intronic chr19:8377580(-) A-I      intronic chr19:8379736(-) A-I      intronic chr19:8383095(-) A-I      intronic chr19:8383173(-) A-I      intronic chr19:8384909(-) A-I      intronic chr19:8383233(-) A-I      intronic chr19:8384827(-) A-I      intronic chr19:8384925(-) A-I      intronic chr19:8384790(-) A-I      intronic chr19:8383839(-) A-I      intronic chr19:8384967(-) A-I      intronic chr19:8384738(-) A-I      intronic chr19:8384939(-) A-I      intronic chr19:8384762(-) A-I      intronic chr19:8384858(-) A-I      intronic chr19:8378247(-) A-I      intronic chr19:8384802(-) A-I      intronic chr19:8384994(-) A-I      intronic chr19:8382341(-) A-I      intronic chr19:8383198(-) A-I      intronic chr19:8384734(-) A-I      intronic chr19:8384894(-) A-I      intronic chr19:8382699(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	NDUFA7	chr19:8384762(-) A-G intron -    22484847 chr19:8384790(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	NDUFA7	chr19:8375391-8375392(-) m6A exon//intron       27773535 chr19:8375424-8375425(-) m6A exon//intron       27773535 chr19:8375433-8375434(-) m6A exon//intron       27773535 chr19:8376218-8376219(-) m6A 3'UTR//intron       27773535 chr19:8376253-8376254(-) m6A 3'UTR//exon//intron       27773535 chr19:8376404-8376405(-) m6A 3'UTR//CDS//exon//intron       27773535 chr19:8381527-8381528(-) m6A CDS//exon//intron       24284625//24981863//27773535//27371828//22575960 chr19:8386204-8386205(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//22575960//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	NDUFA7	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: NDUFA7

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg