Basic Information:

  VIRBase ID:  

VHID00123600

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          ITGB3:  NM_000212     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	ITGB3
miRBase Accession/Entrez ID	MIMAT0014694	3690
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BDPLT16//BDPLT2//CD61//GP3A//GPIIIa//GT

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ITGB3	chr17:45386543(+) A-I      intronic chr17:45386555(+) A-I      intronic chr17:45386570(+) A-I      intronic chr17:45386602(+) A-I      intronic chr17:45386489(+) A-I      intronic chr17:45387076(+) A-I      intronic chr17:45387079(+) A-I      intronic chr17:45387080(+) A-I      intronic chr17:45387084(+) A-I      intronic chr17:45385373(+) A-I      intronic chr17:45385370(+) A-I      intronic chr17:45386604(+) A-I      intronic chr17:45332605(+) A-I      intronic chr17:45385356(+) A-I      intronic chr17:45332554(+) A-I      intronic chr17:45334824(+) A-I      intronic chr17:45387102(+) A-I      intronic chr17:45387103(+) A-I      intronic chr17:45387108(+) A-I      intronic chr17:45387109(+) A-I      intronic chr17:45387110(+) A-I      intronic chr17:45387111(+) A-I      intronic chr17:45387114(+) A-I      intronic chr17:45336056(+) A-I      intronic chr17:45385312(+) A-I      intronic chr17:45385333(+) A-I      intronic chr17:45385336(+) A-I      intronic chr17:45385346(+) A-I      intronic chr17:45386539(+) A-I      intronic chr17:45385385(+) A-I      intronic chr17:45385381(+) A-I      intronic chr17:45385379(+) A-I      intronic chr17:45385374(+) A-I      intronic chr17:45385411(+) A-I      intronic chr17:45385417(+) A-I      intronic chr17:45387073(+) A-I      intronic chr17:45387074(+) A-I      intronic chr17:45387157(+) A-I      intronic chr17:45387241(+) A-I      intronic chr17:45387242(+) A-I      intronic chr17:45385453(+) A-I      intronic chr17:45385457(+) A-I      intronic chr17:45386481(+) A-I      intronic chr17:45386513(+) A-I      intronic chr17:45386526(+) A-I      intronic chr17:45386547(+) A-I      intronic chr17:45386553(+) A-I      intronic chr17:45387005(+) A-I      intronic chr17:45387031(+) A-I      intronic chr17:45387045(+) A-I      intronic chr17:45387245(+) A-I      intronic chr17:45387050(+) A-I      intronic chr17:45385276(+) A-I      intronic chr17:45387246(+) A-I      intronic chr17:45332579(+) A-I      intronic chr17:45332592(+) A-I      intronic chr17:45332927(+) A-I      intronic chr17:45333558(+) A-I      intronic chr17:45333603(+) A-I      intronic chr17:45333661(+) A-I      intronic chr17:45336043(+) A-I      intronic chr17:45336047(+) A-I      intronic chr17:45336048(+) A-I      intronic chr17:45336083(+) A-I      intronic chr17:45337106(+) A-I      intronic chr17:45337107(+) A-I      intronic chr17:45366756(+) A-I      intronic chr17:45366761(+) A-I      intronic chr17:45374911(+) A-I      intronic chr17:45364995(+) A-I      intronic chr17:45385277(+) A-I      intronic chr17:45385299(+) A-I      intronic chr17:45385382(+) A-I      intronic chr17:45333554(+) A-I      intronic chr17:45374962(+) A-I      intronic chr17:45387004(+) A-I      intronic chr17:45336071(+) A-I      intronic chr17:45335992(+) A-I      intronic chr17:45333594(+) A-I      intronic chr17:45375056(+) A-I      intronic chr17:45387089(+) A-I      intronic chr17:45386514(+) A-I      intronic chr17:45333582(+) A-I      intronic chr17:45333576(+) A-I      intronic chr17:45333060(+) A-I      intronic chr17:45335994(+) A-I      intronic chr17:45375197(+) A-I      intronic chr17:45337010(+) A-I      intronic chr17:45333650(+) A-I      intronic chr17:45333078(+) A-I      intronic chr17:45387206(+) A-I      intronic chr17:45333048(+) A-I      intronic chr17:45333568(+) A-I      intronic chr17:45385949(+) A-I      intronic chr17:45386624(+) A-I      intronic chr17:45332953(+) A-I      intronic chr17:45371012(+) A-I      intronic chr17:45332836(+) A-I      intronic chr17:45385412(+) A-I      intronic chr17:45381522(+) A-I      intronic chr17:45332617(+) A-I      intronic chr17:45332968(+) A-I      intronic chr17:45365076(+) A-I      intronic chr17:45336006(+) A-I      intronic chr17:45385969(+) A-I      intronic chr17:45375228(+) A-I      intronic chr17:45387170(+) A-I      intronic chr17:45387150(+) A-I      intronic chr17:45374766(+) A-I      intronic chr17:45333047(+) A-I      intronic chr17:45386608(+) A-I      intronic chr17:45385893(+) A-I      intronic chr17:45333073(+) A-I      intronic chr17:45336018(+) A-I      intronic chr17:45386679(+) A-I      intronic chr17:45387207(+) A-I      intronic chr17:45332619(+) A-I      intronic chr17:45375218(+) A-I      intronic chr17:45333577(+) A-I      intronic chr17:45385291(+) A-I      intronic chr17:45375183(+) A-I      intronic chr17:45365075(+) A-I      intronic chr17:45332971(+) A-I      intronic chr17:45375187(+) A-I      intronic chr17:45386654(+) A-I      intronic chr17:45332607(+) A-I      intronic chr17:45386666(+) A-I      intronic chr17:45333606(+) A-I      intronic chr17:45387140(+) A-I      intronic chr17:45332943(+) A-I      intronic chr17:45337101(+) A-I      intronic chr17:45376416(+) A-I      intronic chr17:45333622(+) A-I      intronic chr17:45332997(+) A-I      intronic chr17:45332988(+) A-I      intronic chr17:45336011(+) A-I      intronic chr17:45386518(+) A-I      intronic chr17:45387181(+) A-I      intronic chr17:45386638(+) A-I      intronic chr17:45332528(+) A-I      intronic chr17:45385435(+) A-I      intronic chr17:45387146(+) A-I      intronic chr17:45332857(+) A-I      intronic chr17:45385323(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	ITGB3	chr17:45386638(+) A-I intron -    21960545 chr17:45386666(+) A-I intron -    21960545 chr17:45387089(+) A-I intron -    21960545 chr17:45387206(+) A-I intron -    21960545 chr17:45336018(+) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITGB3	chr17:45369589-45369590(+) m6A CDS       24209618//24981863 chr17:45369647-45369648(+) m6A CDS       24209618//24981863 chr17:45369681-45369682(+) m6A CDS       24209618//24981863 chr17:45369751-45369752(+) m6A CDS       24209618//24981863 chr17:45376697-45376698(+) m6A CDS       - chr17:45376720-45376721(+) m6A CDS       - chr17:45384927-45384928(+) m6A CDS       - chr17:45384998-45384999(+) m6A CDS       - chr17:45387646-45387647(+) m6A 3'UTR       24981863 chr17:45389034-45389035(+) m6A 3'UTR       24981863 chr17:45389043-45389044(+) m6A 3'UTR       24981863 chr17:45389063-45389064(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITGB3	Cytosol HeLa-S3 cells     - Exosome Plasma     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: ITGB3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg