Basic Information:

  VIRBase ID:  

VHID00123504

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2202

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H16:  MIMAT0014694          HOXB7:  NM_004502     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H16	HOXB7
miRBase Accession/Entrez ID	MIMAT0014694	3217
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HHO.C1//Hox-2.3//HOX2//HOX2C

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HOXB7	chr17:46684720-46684721(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:46684798-46684799(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:46684811-46684812(-) m6A 3'UTR       24284625//24981863//27773535//22575960//22608085 chr17:46685037-46685038(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr17:46685065-46685066(-) m6A 3'UTR//exon       24284625//24981863//27773535//27371828//22608085 chr17:46685076-46685077(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr17:46685085-46685086(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr17:46685092-46685093(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr17:46685097-46685098(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//22608085 chr17:46685124-46685125(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//27773536//22608085 chr17:46685137-46685138(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//27773536//22608085 chr17:46685176-46685177(-) m6A 3'UTR//exon       24284625//24209618//24981863//27773535//27371828//27773536//22608085 chr17:46685237-46685238(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685250-46685251(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685265-46685266(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685270-46685271(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685297-46685298(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685320-46685321(-) m6A CDS//exon       24284625//24209618//24981863//27773535//27371828//27773536//22575960//22608085 chr17:46685412-46685413(-) m6A CDS//exon       24209618//24981863//22608085 chr17:46685430-46685431(-) m6A CDS//exon       24209618//24981863//22608085 chr17:46685454-46685455(-) m6A CDS//exon       24209618//24981863//22608085 chr17:46685666-46685667(-) m6A exon//intron       24981863//22608085 chr17:46687930-46687931(-) m6A CDS//intron       24981863 chr17:46687936-46687937(-) m6A CDS//intron       24981863 chr17:46687996-46687997(-) m6A CDS//intron       24981863 chr17:46688196-46688197(-) m6A CDS//intron       24981863 chr17:46688323-46688324(-) m6A 5'UTR//intron       24981863 chr17:46688359-46688360(-) m6A 5'UTR//intron       24981863 chr17:46688907-46688908(-) m6A intron       24981863 chr17:46690138-46690139(-) m6A intron       24981863 chr17:46690550-46690551(-) m6A intron       24981863//27773536//22608085 chr17:46690629-46690630(-) m6A intron       24284625//24981863//27773536//22608085 chr17:46690672-46690673(-) m6A intron       24284625//24981863//27773536//22608085 chr17:46690681-46690682(-) m6A intron       24284625//24981863//27773536//22608085 chr17:46690708-46690709(-) m6A intron       24284625//24981863//27773536//22608085 chr17:46690731-46690732(-) m6A intron       24284625//24981863//22608085 chr17:46690743-46690744(-) m6A intron       24284625//24981863//22608085 chr17:46690823-46690824(-) m6A intron       24284625//24981863//22608085 chr17:46690841-46690842(-) m6A intron       24284625//24981863//22608085 chr17:46691740-46691741(-) m6A intron       24981863 chr17:46691758-46691759(-) m6A intron       24981863 chr17:46691824-46691825(-) m6A intron       24981863 chr17:46691851-46691852(-) m6A intron       24981863 chr17:46691974-46691975(-) m6A intron       24981863//22608085 chr17:46691999-46692000(-) Y intron       26075521 chr17:46692023-46692024(-) m6A intron       24981863//22608085 chr17:46692282-46692283(-) m6A intron       24981863 chr17:46692438-46692439(-) m6A intron       24981863 chr17:46692449-46692450(-) m6A intron       24981863 chr17:46698738-46698739(-) m6A intron       24284625//24209618//24981863//22608085 chr17:46698773-46698774(-) m6A intron       24284625//24209618//24981863//22608085 chr17:46698890-46698891(-) m6A intron       24284625 chr17:46698976-46698977(-) m6A intron       24284625//27773536 chr17:46699096-46699097(-) m6A intron       24284625 chr17:46699110-46699111(-) m6A intron       24284625 chr17:46699180-46699181(-) m6A intron       24284625//24209618 chr17:46699345-46699346(-) m6A intron       24284625//24209618//24981863//22608085 chr17:46699406-46699407(-) m6A intron       24284625//24209618//24981863//22608085 chr17:46699747-46699748(-) m6A intron       24981863 chr17:46699758-46699759(-) m6A intron       24981863 chr17:46699783-46699784(-) m6A intron       24981863 chr17:46699854-46699855(-) m6A intron       24981863//27773535 chr17:46699881-46699882(-) m6A intron       24981863//27773535 chr17:46699988-46699989(-) m6A intron       - chr17:46700310-46700311(-) m6A intron       24284625//24209618//24981863//22575960//22608085 chr17:46700333-46700334(-) m6A intron       24284625//24209618//24981863//22575960//22608085 chr17:46700354-46700355(-) m6A intron       24284625//24209618//24981863//22575960//22608085 chr17:46700376-46700377(-) m6A intron       24284625//24209618//24981863//22575960//22608085 chr17:46703134-46703135(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085 chr17:46703161-46703162(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085 chr17:46703175-46703176(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085 chr17:46703213-46703214(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085 chr17:46703241-46703242(-) m6A intron       24284625//24209618//24981863//27371828//27773536//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HOXB7	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H16
Interactor2: HOXB7

Evidence Support:

Prediction-Evidence	miRanda//Targetscan
Support Database	VmiReg