Basic Information:

  VIRBase ID:  

VHID00122528

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          GPR153:  NM_207370     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	GPR153
miRBase Accession/Entrez ID	MIMAT0014693	387509
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	PGR1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GPR153	chr1:6319276(-) A-I      intronic chr1:6315984(-) A-I      intronic chr1:6319239(-) A-I      intronic chr1:6319275(-) A-I      intronic chr1:6319213(-) A-I      intronic chr1:6319191(-) A-I      intronic chr1:6319104(-) A-I      intronic chr1:6315681(-) A-I      intronic chr1:6315841(-) A-I      intronic chr1:6315850(-) A-I      intronic chr1:6319228(-) A-I      intronic chr1:6319070(-) A-I      intronic chr1:6312006(-) A-I      intronic chr1:6319099(-) A-I      intronic chr1:6315656(-) A-I      intronic chr1:6316849(-) A-I      intronic chr1:6313356(-) A-I      intronic chr1:6318325(-) A-I      intronic chr1:6311953(-) A-I      intronic chr1:6319265(-) A-I      intronic chr1:6313417(-) A-I      intronic chr1:6319199(-) A-I      intronic chr1:6319138(-) A-I      intronic chr1:6319320(-) A-I      intronic chr1:6319245(-) A-I      intronic chr1:6316574(-) A-I      intronic chr1:6311928(-) A-I      intronic chr1:6319321(-) A-I      intronic chr1:6311994(-) A-I      intronic chr1:6318462(-) A-I      intronic chr1:6316835(-) A-I      intronic chr1:6312000(-) A-I      intronic chr1:6315780(-) A-I      intronic chr1:6319221(-) A-I      intronic chr1:6313374(-) A-I      intronic chr1:6316657(-) A-I      intronic chr1:6318416(-) A-I      intronic chr1:6315530(-) A-I      intronic chr1:6319209(-) A-I      intronic chr1:6313373(-) A-I      intronic chr1:6315775(-) A-I      intronic chr1:6319308(-) A-I      intronic chr1:6313409(-) A-I      intronic chr1:6319316(-) A-I      intronic chr1:6319164(-) A-I      intronic chr1:6313208(-) A-I      intronic chr1:6318299(-) A-I      intronic chr1:6318461(-) A-I      intronic chr1:6319212(-) A-I      intronic chr1:6313393(-) A-I      intronic chr1:6315423(-) A-I      intronic chr1:6315877(-) A-I      intronic chr1:6315663(-) A-I      intronic chr1:6311917(-) A-I      intronic chr1:6318364(-) A-I      intronic chr1:6316082(-) A-I      intronic chr1:6311993(-) A-I      intronic chr1:6316592(-) A-I      intronic chr1:6311954(-) A-I      intronic chr1:6318231(-) A-I      intronic chr1:6316834(-) A-I      intronic chr1:6319103(-) A-I      intronic chr1:6319291(-) A-I      intronic chr1:6315529(-) A-I      intronic chr1:6313201(-) A-I      intronic chr1:6318470(-) A-I      intronic chr1:6318316(-) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	GPR153	chr1:6313201(-) A-G intron -    22484847 chr1:6313373(-) A-G intron -    22484847 chr1:6318231(-) A-G intron -    22484847 chr1:6319070(-) A-G intron -    22484847 chr1:6319099(-) A-G intron -    22484847 chr1:6319103(-) A-G intron -    22484847 chr1:6319221(-) A-G intron -    22484847 chr1:6319321(-) A-G intron -    22484847

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GPR153	chr1:6307812-6307813(-) m6A 3'UTR       25456834 chr1:6307875-6307876(-) m6A 3'UTR       25456834 chr1:6308586-6308587(-) m6A 3'UTR       24284625 chr1:6308622-6308623(-) m6A 3'UTR       24284625 chr1:6308879-6308880(-) m6A 3'UTR       24284625//25456834//27773536 chr1:6309022-6309023(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:6309043-6309044(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:6309050-6309051(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085 chr1:6309305-6309306(-) m6A 3'UTR       25456834//24981863//27371828//27773536//22608085 chr1:6309395-6309396(-) m6A 3'UTR       24209618//25456834//24981863//27371828//27773536//22608085 chr1:6309419-6309420(-) m6A CDS       24209618//25456834//24981863//27371828//27773536//22608085 chr1:6309968-6309969(-) m6A CDS       24209618//25456834//27371828//27773536 chr1:6310518-6310519(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22608085 chr1:6310629-6310630(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085 chr1:6310653-6310654(-) m6A CDS       24284625//25456834//24981863//27371828 chr1:6310681-6310682(-) m6A CDS       24284625//25456834//24981863 chr1:6313839-6313840(-) m6A CDS       27773536 chr1:6313851-6313852(-) m6A CDS       27773536 chr1:6315015-6315016(-) m6A 5'UTR       27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GPR153	Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: GPR153

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg