Basic Information:

  VIRBase ID:  

VHID00122517

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          PNPLA7:  NM_152286     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	PNPLA7
miRBase Accession/Entrez ID	MIMAT0014693	375775
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C9orf111//NTE-R1//NTEL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PNPLA7	chr9:140372101(-) A-I      intronic chr9:140372123(-) A-I      intronic chr9:140376222(-) A-I      intronic chr9:140376231(-) A-I      intronic chr9:140376244(-) A-I      intronic chr9:140372100(-) A-I      intronic chr9:140377485(-) A-I      intronic chr9:140377498(-) A-I      intronic chr9:140377605(-) A-I      intronic chr9:140377992(-) A-I      intronic chr9:140378525(-) A-I      intronic chr9:140378642(-) A-I      intronic chr9:140370021(-) A-I      intronic chr9:140430505(-) A-I      intronic chr9:140430360(-) A-I      intronic chr9:140371987(-) A-I      intronic chr9:140372017(-) A-I      intronic chr9:140362336(-) A-I      intronic chr9:140430348(-) A-I      intronic chr9:140426832(-) A-I      intronic chr9:140377473(-) A-I      intronic chr9:140424502(-) A-I      intronic chr9:140365013(-) A-I      intronic chr9:140424383(-) A-I      intronic chr9:140424234(-) A-I      intronic chr9:140421597(-) A-I      intronic chr9:140420858(-) A-I      intronic chr9:140418349(-) A-I      intronic chr9:140398959(-) A-I      intronic chr9:140397623(-) A-I      intronic chr9:140397616(-) A-I      intronic chr9:140397591(-) A-I      intronic chr9:140378643(-) A-I      intronic chr9:140384576(-) A-I      intronic chr9:140384775(-) A-I      intronic chr9:140384799(-) A-I      intronic chr9:140385660(-) A-I      intronic chr9:140385723(-) A-I      intronic chr9:140390724(-) A-I      intronic chr9:140390735(-) A-I      intronic chr9:140390736(-) A-I      intronic chr9:140390737(-) A-I      intronic chr9:140390772(-) A-I      intronic chr9:140364981(-) A-I      intronic chr9:140362268(-) A-I      intronic chr9:140390929(-) A-I      intronic chr9:140390919(-) A-I      intronic chr9:140390916(-) A-I      intronic chr9:140424384(-) A-I      intronic chr9:140390810(-) A-I      intronic chr9:140390913(-) A-I      intronic chr9:140436755(-) A-I      intronic chr9:140436349(-) A-I      intronic chr9:140397555(-) A-I      intronic chr9:140391007(-) A-I      intronic chr9:140434417(-) A-I      intronic chr9:140434402(-) A-I      intronic chr9:140434366(-) A-I      intronic chr9:140433878(-) A-I      intronic chr9:140433756(-) A-I      intronic chr9:140433719(-) A-I      intronic chr9:140433712(-) A-I      intronic chr9:140433708(-) A-I      intronic chr9:140391162(-) A-I      intronic chr9:140433695(-) A-I      intronic chr9:140433676(-) A-I      intronic chr9:140433646(-) A-I      intronic chr9:140433356(-) A-I      intronic chr9:140431827(-) A-I      intronic chr9:140366873(-) A-I      intronic chr9:140366858(-) A-I      intronic chr9:140367344(-) A-I      intronic chr9:140367369(-) A-I      intronic chr9:140368596(-) A-I      intronic chr9:140368608(-) A-I      intronic chr9:140368609(-) A-I      intronic chr9:140369220(-) A-I      intronic chr9:140369221(-) A-I      intronic chr9:140369222(-) A-I      intronic chr9:140421002(-) A-I      intronic chr9:140426806(-) A-I      intronic chr9:140431842(-) A-I      intronic chr9:140436799(-) A-I      intronic chr9:140421673(-) A-I      intronic chr9:140433982(-) A-I      intronic chr9:140421607(-) A-I      intronic chr9:140433355(-) A-I      intronic chr9:140407174(-) A-I      intronic chr9:140418217(-) A-I      intronic chr9:140424164(-) A-I      intronic chr9:140426418(-) A-I      intronic chr9:140434059(-) A-I      intronic chr9:140434035(-) A-I      intronic chr9:140434464(-) A-I      intronic chr9:140424157(-) A-I      intronic chr9:140421499(-) A-I      intronic chr9:140420868(-) A-I      intronic chr9:140431943(-) A-I      intronic chr9:140434508(-) A-I      intronic chr9:140433498(-) A-I      intronic chr9:140420894(-) A-I      intronic chr9:140433951(-) A-I      intronic chr9:140436296(-) A-I      intronic chr9:140433585(-) A-I      intronic chr9:140424305(-) A-I      intronic chr9:140432039(-) A-I      intronic chr9:140424247(-) A-I      intronic chr9:140420904(-) A-I      intronic chr9:140433612(-) A-I      intronic chr9:140426754(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PNPLA7	chr9:140354479-140354480(-) m6A 3'UTR//exon       27371828 chr9:140354498-140354499(-) m6A 3'UTR//exon       27371828 chr9:140354536-140354537(-) m6A 3'UTR//exon       27371828 chr9:140354595-140354596(-) m6A 3'UTR//exon       - chr9:140354802-140354803(-) m6A 3'UTR//exon       - chr9:140354877-140354878(-) m6A CDS//exon       - chr9:140355089-140355090(-) m6A CDS//exon       - chr9:140355122-140355123(-) m6A CDS//exon       - chr9:140355216-140355217(-) m6A exon//intron       - chr9:140355330-140355331(-) m6A exon//intron       - chr9:140355360-140355361(-) m6A exon//intron       - chr9:140355365-140355366(-) m6A exon//intron       - chr9:140355403-140355404(-) m6A exon//intron       - chr9:140355561-140355562(-) m6A exon//intron       - chr9:140355566-140355567(-) m6A exon//intron       - chr9:140355650-140355651(-) m6A exon//intron       - chr9:140355798-140355799(-) m6A exon//intron       - chr9:140356040-140356041(-) m6A CDS//exon       27371828 chr9:140356122-140356123(-) m6A exon//intron       - chr9:140356775-140356776(-) m6A CDS//exon       - chr9:140356807-140356808(-) m6A exon//intron       - chr9:140356860-140356861(-) m6A exon//intron       - chr9:140356891-140356892(-) m6A exon//intron       - chr9:140357158-140357159(-) m6A CDS//exon       - chr9:140357215-140357216(-) m6A CDS//exon       - chr9:140357554-140357555(-) m6A exon//intron       - chr9:140357594-140357595(-) m6A exon//intron       - chr9:140357613-140357614(-) m6A exon//intron       - chr9:140357701-140357702(-) m6A exon//intron       - chr9:140387474-140387475(-) m6A CDS       - chr9:140444900-140444901(-) m6A 5'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PNPLA7	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Exosome Blood     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: PNPLA7

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg