Basic Information:

  VIRBase ID:  

VHID00122437

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          CCDC150:  NM_001080539     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	CCDC150
miRBase Accession/Entrez ID	MIMAT0014693	284992
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CCDC150	chr2:197551618(+) A-I      intronic chr2:197509823(+) A-I      intronic chr2:197551617(+) A-I      intronic chr2:197551543(+) A-I      intronic chr2:197551623(+) A-I      intronic chr2:197509798(+) A-I      intronic chr2:197587280(+) A-I      intronic chr2:197587262(+) A-I      intronic chr2:197567186(+) A-I      intronic chr2:197582360(+) A-I      intronic chr2:197582361(+) A-I      intronic chr2:197507533(+) A-I      intronic chr2:197559333(+) A-I      intronic chr2:197560390(+) A-I      intronic chr2:197560446(+) A-I      intronic chr2:197558881(+) A-I      intronic chr2:197588141(+) A-I      intronic chr2:197532942(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCDC150	chr2:197504486-197504487(+) m6A 5'UTR//exon       22608085 chr2:197504494-197504495(+) m6A CDS//exon       22608085 chr2:197511076-197511077(+) m6A CDS//exon//intron       22608085 chr2:197593990-197593991(+) m6A 3'UTR//CDS//exon       24981863 chr2:197594048-197594049(+) m6A 3'UTR//CDS//exon       24981863 chr2:197594778-197594779(+) m6A 3'UTR//CDS       27773535 chr2:197595594-197595595(+) m6A 3'UTR//CDS//exon       24981863//27773535 chr2:197595602-197595603(+) m6A 3'UTR//CDS//exon       24981863 chr2:197597379-197597380(+) m6A 3'UTR//exon//intron       24209618

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCDC150	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)     - Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: CCDC150

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg