Basic Information:

  VIRBase ID:  

VHID00122217

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          CLDN19:  NM_001185117     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	CLDN19
miRBase Accession/Entrez ID	MIMAT0014693	149461
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HOMG5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CLDN19	chr1:43198813(-) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CLDN19	chr1:43199546-43199547(-) m6A 3'UTR       25456834 chr1:43199702-43199703(-) m6A 3'UTR       25456834 chr1:43199869-43199870(-) m6A 3'UTR       27773535 chr1:43201262-43201263(-) m6A 3'UTR//intron       25456834 chr1:43201349-43201350(-) m6A 3'UTR//intron       25456834 chr1:43201363-43201364(-) m6A 3'UTR//intron       25456834 chr1:43201381-43201382(-) m6A 3'UTR//intron       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CLDN19	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: CLDN19

Evidence Support:

Prediction-Evidence	miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg