Detail Information

Basic Information:


  VIRBase ID:  

VHID00122188

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:           RBFOX3:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H15 RBFOX3
miRBase
Accession/Entrez ID		 MIMAT0014693 146713
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - FOX-3//FOX3//HRNBP3//NEUN

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR RBFOX3
chr17:77351900(-) A-I      intronic
chr17:77351895(-) A-I      intronic
chr17:77351890(-) A-I      intronic
chr17:77351882(-) A-I      intronic
chr17:77351881(-) A-I      intronic
chr17:77230925(-) A-I      ncRNA
chr17:77351918(-) A-I      intronic
chr17:77354259(-) A-I      intronic
chr17:77354246(-) A-I      intronic
chr17:77354241(-) A-I      intronic
chr17:77354221(-) A-I      intronic
chr17:77354203(-) A-I      intronic
chr17:77354195(-) A-I      intronic
chr17:77354192(-) A-I      intronic
chr17:77351927(-) A-I      intronic
chr17:77351919(-) A-I      intronic
chr17:77351913(-) A-I      intronic
chr17:77351909(-) A-I      intronic
chr17:77351905(-) A-I      intronic
chr17:77352519(-) A-I      intronic
chr17:77351876(-) A-I      intronic
chr17:77333695(-) A-I      intronic
chr17:77243541(-) A-I      intronic
chr17:77352523(-) A-I      intronic
chr17:77351788(-) A-I      intronic
chr17:77351759(-) A-I      intronic
chr17:77253935(-) A-I      intronic
chr17:77399958(-) A-I      intronic
chr17:77399934(-) A-I      intronic
chr17:77354307(-) A-I      intronic
chr17:77354300(-) A-I      intronic
chr17:77354292(-) A-I      intronic
chr17:77354279(-) A-I      intronic
chr17:77354278(-) A-I      intronic
chr17:77169170(-) A-I      intronic
chr17:77289610(-) A-I      intronic
chr17:77542967(-) A-I      intronic
chr17:77225267(-) A-I      intronic
chr17:77253664(-) A-I      intronic
chr17:77403286(-) A-I      intronic
chr17:77542985(-) A-I      intronic
chr17:77225473(-) A-I      intronic
chr17:77353711(-) A-I      intronic
chr17:77247055(-) A-I      intronic
chr17:77332945(-) A-I      intronic
chr17:77225493(-) A-I      intronic
chr17:77535177(-) A-I      intronic
chr17:77296125(-) A-I      intronic
chr17:77296150(-) A-I      intronic
chr17:77253723(-) A-I      intronic
chr17:77281841(-) A-I      intronic
chr17:77340819(-) A-I      intronic
chr17:77299196(-) A-I      intronic
chr17:77353538(-) A-I      intronic
chr17:77225541(-) A-I      intronic
chr17:77543339(-) A-I      intronic
chr17:77167770(-) A-I      intronic
chr17:77112514(-) A-I      intronic
chr17:77533000(-) A-I      intronic
chr17:77344735(-) A-I      intronic
chr17:77225551(-) A-I      intronic
chr17:77532336(-) A-I      intronic
chr17:77193680(-) A-I      intronic
chr17:77353506(-) A-I      intronic
chr17:77157954(-) A-I      intronic
chr17:77354681(-) A-I      intronic
chr17:77370079(-) A-I      intronic
chr17:77401598(-) A-I      intronic
chr17:77532232(-) A-I      intronic
chr17:77226448(-) A-I      intronic
chr17:77353709(-) A-I      intronic
chr17:77204906(-) A-I      intronic
chr17:77209074(-) A-I      intronic
chr17:77543365(-) A-I      intronic
chr17:77355972(-) A-I      intronic
chr17:77193704(-) A-I      intronic
chr17:77400065(-) A-I      intronic
chr17:77204945(-) A-I      intronic
chr17:77299221(-) A-I      intronic
chr17:77253791(-) A-I      intronic
chr17:77299093(-) A-I      intronic
chr17:77252837(-) A-I      intronic
chr17:77416178(-) A-I      intronic
chr17:77401797(-) A-I      intronic
chr17:77237174(-) A-I      intronic
chr17:77299179(-) A-I      intronic
chr17:77532324(-) A-I      intronic
chr17:77334271(-) A-I      intronic
chr17:77543326(-) A-I      intronic
chr17:77335334(-) A-I      intronic
chr17:77542918(-) A-I      intronic
chr17:77296236(-) A-I      intronic
chr17:77403186(-) A-I      intronic
chr17:77543452(-) A-I      intronic
chr17:77377154(-) A-I      intronic
chr17:77427409(-) A-I      intronic
chr17:77241848(-) A-I      intronic
chr17:77354680(-) A-I      intronic
chr17:77400055(-) A-I      intronic
chr17:77532353(-) A-I      intronic
chr17:77335427(-) A-I      intronic
chr17:77403118(-) A-I      intronic
chr17:77400026(-) A-I      intronic
chr17:77427534(-) A-I      intronic
chr17:77157380(-) A-I      intronic
chr17:77395135(-) A-I      intronic
chr17:77394966(-) A-I      intronic
chr17:77403175(-) A-I      intronic
chr17:77531504(-) A-I      intronic
chr17:77403119(-) A-I      intronic
chr17:77296159(-) A-I      intronic
chr17:77401631(-) A-I      intronic
chr17:77252743(-) A-I      intronic
chr17:77204902(-) A-I      intronic
chr17:77344765(-) A-I      intronic
chr17:77532287(-) A-I      intronic
chr17:77186289(-) A-I      intronic
chr17:77543351(-) A-I      intronic
chr17:77396502(-) A-I      intronic
chr17:77543453(-) A-I      intronic
chr17:77198502(-) A-I      intronic
chr17:77543368(-) A-I      intronic
chr17:77241856(-) A-I      intronic
chr17:77545243(-) A-I      intronic
chr17:77299254(-) A-I      intronic
chr17:77198510(-) A-I      intronic
chr17:77544806(-) A-I      intronic
chr17:77205212(-) A-I      intronic
chr17:77182539(-) A-I      intronic
chr17:77106339(-) A-I      intronic
chr17:77395150(-) A-I      intronic
chr17:77542972(-) A-I      intronic
chr17:77432466(-) A-I      intronic
chr17:77414087(-) A-I      intronic
chr17:77209138(-) A-I      intronic
chr17:77333093(-) A-I      intronic
chr17:77335275(-) A-I      intronic
chr17:77333039(-) A-I      intronic
chr17:77209112(-) A-I      intronic
chr17:77094811(-) A-I      intronic
chr17:77356066(-) A-I      intronic
chr17:77232535(-) A-I      intronic
chr17:77335305(-) A-I      intronic
chr17:77355952(-) A-I      intronic
chr17:77252886(-) A-I      intronic
chr17:77532335(-) A-I      intronic
chr17:77490106(-) A-I      intronic

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase RBFOX3
chr17:77085823-77085824(-) m6A 3'UTR       24981863
chr17:77085877-77085878(-) m6A 3'UTR       24981863
chr17:77086107-77086108(-) m6A 3'UTR       25456834
chr17:77086196-77086197(-) m6A 3'UTR       25456834//24981863
chr17:77086293-77086294(-) m6A 3'UTR       25456834//24981863
chr17:77086519-77086520(-) m6A 3'UTR       25456834//24981863
chr17:77086587-77086588(-) m6A 3'UTR       25456834//24981863
chr17:77086645-77086646(-) m6A 3'UTR       25456834//24981863
chr17:77086704-77086705(-) m6A 3'UTR       25456834
chr17:77086746-77086747(-) m6A 3'UTR       25456834
chr17:77086842-77086843(-) m6A 3'UTR       25456834//24981863
chr17:77086851-77086852(-) m6A 3'UTR       25456834//24981863
chr17:77086889-77086890(-) m6A 3'UTR       24981863
chr17:77102844-77102845(-) m6A CDS       -
chr17:77102866-77102867(-) m6A CDS       24981863
chr17:77111583-77111584(-) m6A CDS       24981863
chr17:77111589-77111590(-) m6A CDS       24981863
chr17:77111640-77111641(-) m6A CDS       24981863
chr17:77111688-77111689(-) m6A CDS       24981863
chr17:77111702-77111703(-) m6A CDS       24981863
chr17:77179539-77179540(-) m6A 5'UTR//intron       25456834
chr17:77204542-77204543(-) m6A 5'UTR//intron       25456834

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate RBFOX3
Exosome Blood     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H15
Interactor2: RBFOX3

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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