Basic Information:

  VIRBase ID:  

VHID00122159

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          CCM2L:  NM_001365692     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	CCM2L
miRBase Accession/Entrez ID	MIMAT0014693	140706
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	C20orf160//dJ310O13.5

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	CCM2L	chr20:30608648(+) A-I      intronic chr20:30611634(+) A-I      intronic chr20:30612469(+) A-I      intronic chr20:30608622(+) A-I      intronic chr20:30608631(+) A-I      intronic chr20:30608634(+) A-I      intronic chr20:30608640(+) A-I      intronic chr20:30608636(+) A-I      intronic chr20:30608644(+) A-I      intronic chr20:30614540(+) A-I      intronic chr20:30614480(+) A-I      intronic chr20:30613189(+) A-I      intronic chr20:30613175(+) A-I      intronic chr20:30613136(+) A-I      intronic chr20:30616016(+) A-I      intronic chr20:30604339(+) A-I      intronic chr20:30599198(+) A-I      intronic chr20:30599212(+) A-I      intronic chr20:30599216(+) A-I      intronic chr20:30601324(+) A-I      intronic chr20:30609280(+) A-I      intronic chr20:30609281(+) A-I      intronic chr20:30610936(+) A-I      intronic chr20:30611788(+) A-I      intronic chr20:30612496(+) A-I      intronic chr20:30612519(+) A-I      intronic chr20:30614508(+) A-I      intronic chr20:30614532(+) A-I      intronic chr20:30614536(+) A-I      intronic chr20:30615985(+) A-I      intronic chr20:30612459(+) A-I      intronic chr20:30612470(+) A-I      intronic chr20:30609379(+) A-I      intronic chr20:30609301(+) A-I      intronic chr20:30612509(+) A-I      intronic chr20:30612468(+) A-I      intronic chr20:30604863(+) A-I      intronic chr20:30612515(+) A-I      intronic chr20:30612465(+) A-I      intronic chr20:30602349(+) A-I      intronic chr20:30600112(+) A-I      intronic chr20:30613224(+) A-I      intronic chr20:30614618(+) A-I      intronic chr20:30613305(+) A-I      intronic chr20:30613201(+) A-I      intronic chr20:30599287(+) A-I      intronic chr20:30613257(+) A-I      intronic chr20:30613184(+) A-I      intronic chr20:30611717(+) A-I      intronic chr20:30611714(+) A-I      intronic chr20:30614804(+) A-I      intronic chr20:30611699(+) A-I      intronic chr20:30613217(+) A-I      intronic chr20:30612368(+) A-I      intronic chr20:30612542(+) A-I      intronic chr20:30611633(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	CCM2L	chr20:30606883-30606884(+) m6A CDS       25456834 chr20:30607159-30607160(+) m6A CDS       24209618 chr20:30618824-30618825(+) m6A 3'UTR//CDS       25456834 chr20:30618830-30618831(+) m6A 3'UTR//CDS       25456834 chr20:30619103-30619104(+) m6A 3'UTR//CDS       - chr20:30619180-30619181(+) m6A 3'UTR       25456834 chr20:30619419-30619420(+) m6A 3'UTR       24209618//25456834 chr20:30619518-30619519(+) m6A 3'UTR       24209618//25456834 chr20:30619545-30619546(+) m6A 3'UTR       24209618//25456834 chr20:30619610-30619611(+) m6A 3'UTR       25456834//24981863 chr20:30619624-30619625(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	CCM2L	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: CCM2L

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg