Basic Information:

  VIRBase ID:  

VHID00122100

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2494

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          B3GALT6:  NM_080605     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	B3GALT6
miRBase Accession/Entrez ID	MIMAT0014693	126792
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	ALGAZ//beta3GalT6//EDSP2//EDSSPD2//SEMDJL1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	B3GALT6	chr1:1170192(+) A-I      3'UTR

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	B3GALT6	chr1:1168010-1168011(+) m6A CDS       25456834//24981863//22575960//22608085 chr1:1168049-1168050(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr1:1168511-1168512(+) m6A CDS       24284625//25456834//24981863//26404942//22575960//22608085 chr1:1168672-1168673(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:1168794-1168795(+) m6A 3'UTR       24284625//25456834//24981863//22575960 chr1:1168851-1168852(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:1169155-1169156(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169169-1169170(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169222-1169223(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169230-1169231(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169266-1169267(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169289-1169290(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr1:1169351-1169352(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1169378-1169379(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1169422-1169423(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1169427-1169428(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1169502-1169503(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:1169543-1169544(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:1169597-1169598(+) m6A 3'UTR       24284625//24981863//22575960//22608085 chr1:1169640-1169641(+) m6A 3'UTR       24284625//22575960 chr1:1169873-1169874(+) m6A 3'UTR       24284625//25456834//24981863//22608085 chr1:1169936-1169937(+) m6A 3'UTR       24284625//25456834//24981863//22575960//22608085 chr1:1169976-1169977(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170000-1170001(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170048-1170049(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170146-1170147(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170186-1170187(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170195-1170196(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170216-1170217(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170228-1170229(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr1:1170310-1170311(+) m6A 3'UTR       24284625//25456834//24981863//27773535//22575960//22608085 chr1:1170396-1170397(+) m6A 3'UTR       24981863//27773535//22608085 chr1:1170416-1170417(+) m6A 3'UTR       24981863//27773535//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	B3GALT6	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     - Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: B3GALT6

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg