Basic Information:

  VIRBase ID:  

VHID00122097

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          C2CD4C:  NM_001136263     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	C2CD4C
miRBase Accession/Entrez ID	MIMAT0014693	126567
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	FAM148C//KIAA1957//NLF3

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	C2CD4C	chr19:405784-405785(-) m6A 3'UTR       25456834 chr19:405824-405825(-) m6A 3'UTR       25456834//27371828 chr19:405924-405925(-) m6A 3'UTR       24209618//25456834 chr19:405990-405991(-) m6A 3'UTR       24209618//25456834 chr19:407053-407054(-) m6A 3'UTR       24209618//25456834//24981863//27371828 chr19:407087-407088(-) m6A 3'UTR       24209618//25456834//24981863//27371828 chr19:407150-407151(-) m6A CDS       24284625//24209618//25456834//24981863//27371828 chr19:407174-407175(-) m6A CDS       24284625//24209618//25456834//24981863//27371828 chr19:407200-407201(-) m6A CDS       24284625//24209618//25456834//24981863//27371828 chr19:407267-407268(-) m6A CDS       25456834//27371828 chr19:407500-407501(-) m6A CDS       25456834//27371828 chr19:407627-407628(-) m6A CDS       25456834//27371828 chr19:408005-408006(-) m6A CDS       25456834//27371828//27773536 chr19:408105-408106(-) m6A CDS       25456834//27371828//27773536 chr19:408131-408132(-) m6A CDS       25456834//27371828//27773536 chr19:408136-408137(-) m6A CDS       25456834//27371828//27773536 chr19:408166-408167(-) m6A CDS       25456834//27371828//27773536 chr19:408272-408273(-) m6A CDS       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	C2CD4C	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: C2CD4C

Evidence Support:

Prediction-Evidence	miRanda//RNAHybrid//Targetscan
Support Database	VmiReg