Detail Information

Basic Information:


  VIRBase ID:  

VHID00122077

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:           SLC43A2:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H15 SLC43A2
miRBase
Accession/Entrez ID		 MIMAT0014693 124935
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - LAT4

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR SLC43A2
chr17:1489943(-) A-I      intronic
chr17:1482334(-) A-I      intronic
chr17:1482335(-) A-I      intronic
chr17:1484164(-) A-I      intronic
chr17:1482323(-) A-I      intronic
chr17:1487322(-) A-I      intronic
chr17:1489746(-) A-I      intronic
chr17:1486229(-) A-I      intronic
chr17:1482318(-) A-I      intronic
chr17:1481998(-) A-I      intronic
chr17:1481989(-) A-I      intronic
chr17:1481954(-) A-I      intronic
chr17:1481890(-) A-I      intronic
chr17:1487413(-) A-I      intronic
chr17:1487405(-) A-I      intronic
chr17:1487298(-) A-I      intronic
chr17:1486305(-) A-I      intronic
chr17:1486290(-) A-I      intronic
chr17:1486251(-) A-I      intronic
chr17:1486210(-) A-I      intronic
chr17:1486207(-) A-I      intronic
chr17:1514872(-) A-I      intronic
chr17:1486156(-) A-I      intronic
chr17:1486151(-) A-I      intronic
chr17:1486114(-) A-I      intronic
chr17:1485377(-) A-I      intronic
chr17:1484243(-) A-I      intronic
chr17:1484196(-) A-I      intronic
chr17:1482588(-) A-I      intronic
chr17:1484170(-) A-I      intronic
chr17:1483984(-) A-I      intronic
chr17:1484176(-) A-I      intronic
chr17:1483369(-) A-I      intronic
chr17:1483365(-) A-I      intronic
chr17:1483019(-) A-I      intronic
chr17:1482551(-) A-I      intronic
chr17:1520873(-) A-I      intronic
chr17:1519280(-) A-I      intronic
chr17:1518506(-) A-I      intronic
chr17:1486161(-) A-I      intronic
chr17:1518399(-) A-I      intronic
chr17:1515425(-) A-I      intronic
chr17:1514887(-) A-I      intronic
chr17:1493087(-) A-I      intronic
chr17:1481898(-) A-I      intronic
chr17:1481914(-) A-I      intronic
chr17:1482525(-) A-I      intronic
chr17:1514842(-) A-I      intronic
chr17:1482327(-) A-I      intronic
chr17:1482303(-) A-I      intronic
chr17:1482262(-) A-I      intronic
chr17:1482040(-) A-I      intronic
chr17:1481933(-) A-I      intronic
chr17:1514834(-) A-I      intronic
chr17:1514781(-) A-I      intronic
chr17:1514780(-) A-I      intronic
chr17:1514772(-) A-I      intronic
chr17:1514707(-) A-I      intronic
chr17:1514417(-) A-I      intronic
chr17:1514350(-) A-I      intronic
chr17:1514232(-) A-I      intronic
chr17:1513491(-) A-I      intronic
chr17:1505565(-) A-I      intronic
chr17:1504119(-) A-I      intronic
chr17:1504118(-) A-I      intronic
chr17:1504094(-) A-I      intronic
chr17:1503877(-) A-I      intronic
chr17:1502913(-) A-I      intronic
chr17:1499959(-) A-I      intronic
chr17:1499939(-) A-I      intronic
chr17:1499934(-) A-I      intronic
chr17:1499121(-) A-I      intronic
chr17:1498928(-) A-I      intronic
chr17:1498913(-) A-I      intronic
chr17:1498463(-) A-I      intronic
chr17:1493096(-) A-I      intronic
chr17:1498418(-) A-I      intronic
chr17:1493208(-) A-I      intronic
chr17:1493108(-) A-I      intronic
chr17:1482631(-) A-I      intronic
chr17:1491545(-) A-I      intronic
chr17:1493077(-) A-I      intronic
chr17:1493073(-) A-I      intronic
chr17:1488385(-) A-I      intronic
chr17:1488067(-) A-I      intronic
chr17:1488057(-) A-I      intronic
chr17:1488051(-) A-I      intronic
chr17:1487422(-) A-I      intronic
chr17:1487421(-) A-I      intronic
chr17:1483391(-) A-I      intronic
chr17:1483396(-) A-I      intronic
chr17:1483399(-) A-I      intronic
chr17:1483485(-) A-I      intronic
chr17:1483980(-) A-I      intronic
chr17:1501709(-) A-I      intronic
chr17:1481918(-) A-I      intronic
chr17:1498836(-) A-I      intronic
chr17:1485185(-) A-I      intronic
chr17:1498904(-) A-I      intronic
chr17:1482976(-) A-I      intronic
chr17:1497162(-) A-I      intronic
chr17:1515395(-) A-I      intronic
chr17:1505556(-) A-I      intronic
chr17:1483392(-) A-I      intronic
chr17:1491436(-) A-I      intronic
chr17:1482982(-) A-I      intronic
chr17:1513662(-) A-I      intronic
chr17:1499012(-) A-I      intronic
chr17:1497270(-) A-I      intronic
chr17:1514763(-) A-I      intronic
chr17:1502912(-) A-I      intronic
chr17:1481884(-) A-I      intronic
chr17:1483264(-) A-I      intronic
chr17:1482027(-) A-I      intronic
chr17:1514847(-) A-I      intronic
chr17:1492947(-) A-I      intronic
chr17:1487466(-) A-I      intronic
chr17:1488379(-) A-I      intronic
chr17:1513764(-) A-I      intronic
chr17:1487354(-) A-I      intronic
chr17:1491931(-) A-I      intronic
chr17:1514749(-) A-I      intronic
chr17:1500463(-) A-I      intronic
chr17:1514263(-) A-I      intronic
chr17:1498785(-) A-I      intronic
chr17:1488551(-) A-I      intronic
chr17:1497163(-) A-I      intronic
chr17:1487845(-) A-I      intronic
chr17:1482012(-) A-I      intronic
chr17:1486128(-) A-I      intronic
chr17:1491536(-) A-I      intronic
chr17:1513695(-) A-I      intronic
chr17:1514335(-) A-I      intronic
chr17:1482877(-) A-I      intronic
chr17:1487392(-) A-I      intronic
chr17:1503615(-) A-I      intronic
chr17:1482912(-) A-I      intronic
chr17:1487851(-) A-I      intronic
chr17:1525612(-) A-I      intronic
chr17:1483297(-) A-I      intronic
chr17:1519255(-) A-I      intronic
chr17:1482291(-) A-I      intronic
chr17:1487318(-) A-I      intronic
chr17:1482178(-) A-I      intronic
chr17:1481992(-) A-I      intronic
chr17:1495479(-) A-I      intronic
chr17:1492755(-) A-I      intronic
chr17:1505551(-) A-I      intronic
chr17:1484212(-) A-I      intronic
chr17:1518881(-) A-I      intronic
chr17:1485550(-) A-I      intronic
chr17:1487976(-) A-I      intronic
chr17:1513443(-) A-I      intronic
chr17:1511174(-) A-I      intronic
chr17:1486176(-) A-I      intronic
chr17:1483332(-) A-I      intronic
chr17:1487286(-) A-I      intronic
chr17:1483358(-) A-I      intronic
chr17:1499070(-) A-I      intronic
chr17:1483313(-) A-I      intronic
chr17:1504141(-) A-I      intronic
chr17:1506181(-) A-I      intronic
chr17:1488395(-) A-I      intronic
chr17:1503566(-) A-I      intronic
chr17:1485544(-) A-I      intronic
chr17:1481978(-) A-I      intronic
chr17:1503618(-) A-I      intronic
chr17:1520966(-) A-I      intronic
chr17:1481995(-) A-I      intronic
chr17:1487843(-) A-I      intronic
chr17:1518607(-) A-I      intronic
chr17:1491558(-) A-I      intronic
chr17:1513989(-) A-I      intronic
chr17:1487918(-) A-I      intronic
chr17:1502467(-) A-I      intronic
chr17:1482498(-) A-I      intronic
chr17:1500428(-) A-I      intronic
chr17:1482708(-) A-I      intronic
chr17:1493051(-) A-I      intronic
chr17:1483349(-) A-I      intronic
chr17:1506191(-) A-I      intronic
chr17:1492727(-) A-I      intronic
chr17:1482017(-) A-I      intronic
chr17:1514267(-) A-I      intronic
chr17:1511192(-) A-I      intronic
chr17:1482037(-) A-I      intronic
chr17:1485620(-) A-I      intronic
chr17:1491869(-) A-I      intronic
chr17:1514272(-) A-I      intronic
chr17:1484160(-) A-I      intronic
chr17:1518530(-) A-I      intronic
chr17:1489925(-) A-I      intronic
chr17:1513438(-) A-I      intronic
chr17:1483084(-) A-I      intronic
chr17:1491414(-) A-I      intronic
chr17:1493081(-) A-I      intronic
chr17:1482042(-) A-I      intronic
chr17:1487282(-) A-I      intronic
chr17:1502525(-) A-I      intronic
chr17:1481927(-) A-I      intronic
chr17:1485640(-) A-I      intronic
chr17:1505552(-) A-I      intronic
chr17:1483009(-) A-I      intronic
chr17:1511247(-) A-I      intronic
chr17:1487944(-) A-I      intronic
chr17:1483118(-) A-I      intronic
chr17:1483036(-) A-I      intronic
chr17:1483993(-) A-I      intronic
chr17:1482190(-) A-I      intronic
chr17:1481852(-) A-I      intronic
chr17:1505857(-) A-I      intronic
chr17:1487913(-) A-I      intronic
chr17:1482371(-) A-I      intronic
chr17:1482742(-) A-I      intronic
chr17:1482510(-) A-I      intronic
chr17:1483346(-) A-I      intronic
chr17:1511876(-) A-I      intronic
chr17:1485538(-) A-I      intronic
chr17:1491914(-) A-I      intronic
chr17:1482633(-) A-I      intronic
chr17:1487416(-) A-I      intronic
chr17:1485205(-) A-I      intronic
chr17:1514299(-) A-I      intronic
chr17:1515356(-) A-I      intronic
chr17:1497161(-) A-I      intronic
chr17:1513341(-) A-I      intronic
chr17:1482095(-) A-I      intronic
chr17:1481856(-) A-I      intronic
chr17:1500634(-) A-I      intronic
chr17:1487393(-) A-I      intronic
chr17:1502918(-) A-I      intronic
chr17:1514241(-) A-I      intronic
chr17:1503334(-) A-I      intronic
chr17:1516021(-) A-I      intronic
chr17:1485567(-) A-I      intronic
chr17:1488383(-) A-I      intronic
chr17:1482000(-) A-I      intronic
chr17:1485280(-) A-I      intronic
chr17:1518608(-) A-I      intronic
chr17:1500427(-) A-I      intronic
chr17:1500542(-) A-I      intronic
chr17:1514240(-) A-I      intronic
chr17:1514329(-) A-I      intronic
chr17:1483074(-) A-I      intronic
chr17:1483484(-) A-I      intronic
chr17:1513927(-) A-I      intronic
chr17:1481997(-) A-I      intronic
chr17:1492928(-) A-I      intronic
chr17:1514305(-) A-I      intronic
chr17:1487328(-) A-I      intronic
chr17:1518677(-) A-I      intronic
chr17:1515386(-) A-I      intronic
chr17:1482511(-) A-I      intronic
chr17:1499089(-) A-I      intronic
chr17:1481959(-) A-I      intronic
chr17:1507629(-) A-I      intronic
chr17:1480323(-) A-I      intronic
chr17:1520864(-) A-I      intronic
chr17:1481960(-) A-I      intronic
chr17:1482983(-) A-I      intronic
chr17:1482395(-) A-I      intronic
chr17:1505574(-) A-I      intronic
chr17:1481950(-) A-I      intronic
chr17:1482365(-) A-I      intronic
chr17:1515355(-) A-I      intronic
chr17:1498864(-) A-I      intronic
chr17:1498451(-) A-I      intronic
chr17:1485543(-) A-I      intronic
chr17:1515537(-) A-I      intronic
chr17:1514712(-) A-I      intronic
chr17:1483054(-) A-I      intronic
chr17:1513928(-) A-I      intronic
chr17:1481986(-) A-I      intronic
chr17:1482352(-) A-I      intronic
chr17:1482999(-) A-I      intronic
chr17:1514882(-) A-I      intronic
chr17:1481855(-) A-I      intronic
chr17:1514246(-) A-I      intronic
chr17:1499090(-) A-I      intronic
chr17:1487223(-) A-I      intronic
chr17:1482094(-) A-I      intronic
chr17:1491568(-) A-I      intronic
chr17:1483400(-) A-I      intronic
chr17:1513374(-) A-I      intronic
chr17:1503945(-) A-I      intronic
chr17:1482313(-) A-I      intronic
chr17:1514883(-) A-I      intronic
chr17:1498910(-) A-I      intronic
chr17:1503953(-) A-I      intronic
chr17:1500752(-) A-I      intronic
chr17:1491532(-) A-I      intronic
chr17:1518683(-) A-I      intronic
chr17:1491448(-) A-I      intronic
chr17:1491597(-) A-I      intronic
chr17:1489924(-) A-I      intronic
chr17:1505737(-) A-I      intronic
chr17:1505683(-) A-I      intronic
chr17:1483403(-) A-I      intronic
Resource Symbol Editing Position Change SeqReg exReg PMID
DARNED SLC43A2
chr17:1483400(-) A-G intron -    22484847
chr17:1483403(-) A-G intron -    22484847

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase SLC43A2
chr17:1474194-1474195(-) m6A 3'UTR       24284625
chr17:1474224-1474225(-) m6A 3'UTR       24284625
chr17:1477526-1477527(-) m6A 3'UTR       24284625
chr17:1477544-1477545(-) m6A 3'UTR       24284625
chr17:1477562-1477563(-) m6A 3'UTR       24284625
chr17:1478176-1478177(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr17:1478229-1478230(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr17:1478264-1478265(-) m6A 3'UTR       24284625//25456834//24981863//27773535//27371828//22575960//22608085
chr17:1478403-1478404(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr17:1478482-1478483(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr17:1478654-1478655(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr17:1478718-1478719(-) m6A 3'UTR       24284625//25456834//24981863//28052920//27371828//27773536//22575960//22608085
chr17:1478806-1478807(-) m6A 3'UTR       24284625//24209618//25456834//24981863//28052920//27773535//27371828//27773536//22575960//22608085
chr17:1478880-1478881(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:1478945-1478946(-) m6A CDS       24284625//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr17:1479900-1479901(-) m6A CDS//exon       24284625
chr17:1479980-1479981(-) m6A CDS//exon       24284625
chr17:1489266-1489267(-) m6A CDS//exon       24284625
chr17:1531100-1531101(-) m6A CDS//exon       24284625//27773536

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate SLC43A2
Chromatin K562 cells     -
Exosome Blood     -
Nucleus HCC cell line (HepG2)     -
Ribosome Colon cancer cells     24393600

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H15
Interactor2: SLC43A2

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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