Detail Information

Basic Information:


  VIRBase ID:  

VHID00121953

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:           MEX3A:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H15 MEX3A
miRBase
Accession/Entrez ID		 MIMAT0014693 92312
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - MEX-3A//RKHD4//RNF162

RNA Editing:


Resource Symbol Editing Position Change Genetic Region
RADAR MEX3A
chr1:156045704(-) A-I      3'UTR

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase MEX3A
chr1:156041833-156041834(-) m6A 3'UTR       27773535
chr1:156041876-156041877(-) m6A 3'UTR       24981863//27773535//22608085
chr1:156041927-156041928(-) m6A 3'UTR       24981863//27773535
chr1:156041986-156041987(-) m6A 3'UTR       27773535
chr1:156042011-156042012(-) m6A 3'UTR       27773535
chr1:156042165-156042166(-) m6A 3'UTR       27773535
chr1:156042196-156042197(-) m6A 3'UTR       27773535
chr1:156042241-156042242(-) m6A 3'UTR       24209618//27773535
chr1:156042248-156042249(-) m6A 3'UTR       24209618//27773535
chr1:156042863-156042864(-) m6A 3'UTR       27773535
chr1:156042974-156042975(-) m6A 3'UTR       27773535
chr1:156043153-156043154(-) m6A 3'UTR       27773535
chr1:156043378-156043379(-) m6A 3'UTR       27773535
chr1:156043400-156043401(-) m6A 3'UTR       27773535
chr1:156043494-156043495(-) m6A 3'UTR       27773535
chr1:156043522-156043523(-) m6A 3'UTR       27773535
chr1:156043574-156043575(-) m6A 3'UTR       27773535
chr1:156043674-156043675(-) m6A 3'UTR       27773535
chr1:156043681-156043682(-) m6A 3'UTR       27773535
chr1:156043720-156043721(-) m6A 3'UTR       27773535
chr1:156043769-156043770(-) m6A 3'UTR       27773535
chr1:156043801-156043802(-) m6A 3'UTR       27773535
chr1:156044026-156044027(-) m6A 3'UTR       27773535
chr1:156044102-156044103(-) m6A 3'UTR       27773535
chr1:156044127-156044128(-) m6A 3'UTR       27773535
chr1:156044222-156044223(-) m6A 3'UTR       24981863//27773535
chr1:156044249-156044250(-) m6A 3'UTR       24981863//27773535
chr1:156044289-156044290(-) m6A 3'UTR       24981863//27773535
chr1:156044305-156044306(-) m6A 3'UTR       24981863//27773535
chr1:156044316-156044317(-) m6A 3'UTR       24981863//27773535
chr1:156044324-156044325(-) m6A 3'UTR       24981863//27773535
chr1:156044379-156044380(-) m6A 3'UTR       24981863//27773535
chr1:156045286-156045287(-) m6A 3'UTR       -
chr1:156046079-156046080(-) m6A 3'UTR       24284625//27773535
chr1:156046150-156046151(-) m6A 3'UTR       24284625//25456834//24981863//27773535//22608085
chr1:156046315-156046316(-) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//27371828//22608085
chr1:156046422-156046423(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:156046472-156046473(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536//22575960//22608085
chr1:156046565-156046566(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046610-156046611(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046625-156046626(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046768-156046769(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046842-156046843(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046884-156046885(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr1:156046917-156046918(-) m6A CDS//exon       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr1:156047170-156047171(-) m6A CDS//intron       24284625//24981863//27371828//22608085
chr1:156047405-156047406(-) m6A CDS//exon       24284625//24981863//27773535//27371828
chr1:156047425-156047426(-) m6A CDS//exon       24284625//24981863//27773535//27371828
chr1:156047443-156047444(-) m6A CDS//exon       24284625//24981863//27773535//27371828
chr1:156051706-156051707(-) m6A CDS       25456834//27371828
chr1:156051735-156051736(-) m6A CDS       -

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate MEX3A
Cytosol K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H15
Interactor2: MEX3A

Evidence Support:


Prediction-Evidence cRep//miRanda//PITA//Rep//Targetscan
Support Database RepTar//VmiReg

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