Basic Information:

  VIRBase ID:  

VHID00121889

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          KNDC1:  NM_001347866     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	KNDC1
miRBase Accession/Entrez ID	MIMAT0014693	85442
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	bB439H18.3//C10orf23//RASGEF2//v-KIND//Very-KIND

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	KNDC1	chr10:134985232(+) A-I      intronic chr10:134986323(+) A-I      intronic chr10:134984900(+) A-I      intronic chr10:134985015(+) A-I      intronic chr10:134985215(+) A-I      intronic chr10:134984892(+) A-I      intronic chr10:134984887(+) A-I      intronic chr10:134986303(+) A-I      intronic chr10:134984917(+) A-I      intronic chr10:134984901(+) A-I      intronic chr10:134985010(+) A-I      intronic chr10:134986353(+) A-I      intronic chr10:134984951(+) A-I      intronic chr10:134985227(+) A-I      intronic chr10:134985209(+) A-I      intronic chr10:134986376(+) A-I      intronic chr10:134985244(+) A-I      intronic chr10:134984875(+) A-I      intronic chr10:134984838(+) A-I      intronic chr10:134982853(+) A-I      intronic chr10:134985272(+) A-I      intronic chr10:134985354(+) A-I      intronic chr10:134986330(+) A-I      intronic chr10:135019449(+) A-I      intronic chr10:134984957(+) A-I      intronic chr10:134986292(+) A-I      intronic chr10:134986477(+) A-I      intronic chr10:134986360(+) A-I      intronic chr10:134986403(+) A-I      intronic chr10:134985359(+) A-I      intronic chr10:134986432(+) A-I      intronic chr10:134986380(+) A-I      intronic chr10:134986297(+) A-I      intronic chr10:134986368(+) A-I      intronic chr10:135031015(+) A-I      intronic chr10:134985241(+) A-I      intronic chr10:134985184(+) A-I      intronic chr10:134985329(+) A-I      intronic chr10:134986226(+) A-I      intronic chr10:134985200(+) A-I      intronic chr10:134984997(+) A-I      intronic chr10:134985260(+) A-I      intronic chr10:134984959(+) A-I      intronic chr10:134985355(+) A-I      intronic chr10:134986392(+) A-I      intronic chr10:134985011(+) A-I      intronic chr10:134985394(+) A-I      intronic chr10:134986456(+) A-I      intronic chr10:134985249(+) A-I      intronic chr10:134984839(+) A-I      intronic chr10:134986462(+) A-I      intronic chr10:134985240(+) A-I      intronic chr10:134986400(+) A-I      intronic chr10:134986315(+) A-I      intronic chr10:134985051(+) A-I      intronic chr10:134986286(+) A-I      intronic chr10:134991923(+) A-I      intronic chr10:134991897(+) A-I      intronic chr10:134983570(+) A-I      intronic chr10:134984823(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	KNDC1	chr10:134983570(+) A-I intron -    15342557 chr10:134984957(+) A-I intron -    15342557   //15258596 chr10:134984959(+) A-I intron -    15342557   //15258596   //22028664 chr10:134985184(+) A-I intron -    15342557 chr10:134985200(+) A-I intron -    15342557 chr10:134985209(+) A-I intron -    15342557 chr10:134985215(+) A-I intron -    15342557 chr10:134985219(+) A-I intron -    15342557 chr10:134985240(+) A-I intron -    15342557 chr10:134985241(+) A-I intron -    15342557 chr10:134985249(+) A-I intron -    15342557 chr10:134985260(+) A-I intron -    15342557   //15258596 chr10:134985272(+) A-I intron -    15342557   //15258596 chr10:134985354(+) A-I intron -    15342557   //15258596 chr10:134985355(+) A-I intron -    15342557   //15258596 chr10:134986303(+) A-I intron -    15342557 chr10:134986315(+) A-I intron -    15342557 chr10:134986330(+) A-I intron -    15342557 chr10:134986368(+) A-I intron -    15342557 chr10:134986376(+) A-I intron -    15342557 chr10:134986380(+) A-I intron -    15342557 chr10:134986400(+) A-I intron -    15342557 chr10:134986403(+) A-I intron -    15342557 chr10:134986432(+) A-I intron -    15342557 chr10:134984823(+) A-I intron -    22028664 chr10:134984887(+) A-I intron -    22028664 chr10:134984892(+) A-I intron -    22028664 chr10:134984900(+) A-I intron -    22028664 chr10:134984901(+) A-I intron -    22028664 chr10:134984917(+) A-I intron -    22028664 chr10:134984951(+) A-I intron -    22028664 chr10:134985010(+) A-I intron -    22028664 chr10:134985011(+) A-I intron -    22028664 chr10:134985051(+) A-I intron -    22028664

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	KNDC1	chr10:134999729-134999730(+) m6A CDS       24284625//25456834 chr10:134999870-134999871(+) m6A CDS       25456834//24981863//22608085 chr10:134999891-134999892(+) m6A CDS       25456834//24981863//22575960//22608085 chr10:134999961-134999962(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr10:135000002-135000003(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr10:135000033-135000034(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr10:135000043-135000044(+) m6A CDS       24284625//25456834//24981863//22575960//22608085 chr10:135000083-135000084(+) m6A CDS       24284625//25456834//24981863//22608085 chr10:135000112-135000113(+) m6A CDS       24284625//25456834//24981863//22608085 chr10:135012314-135012315(+) m6A CDS       25456834 chr10:135015030-135015031(+) m6A CDS       25456834 chr10:135015076-135015077(+) m6A CDS       25456834 chr10:135015100-135015101(+) m6A CDS       25456834 chr10:135015172-135015173(+) m6A CDS       25456834 chr10:135038359-135038360(+) m6A CDS       25456834 chr10:135038507-135038508(+) m6A 3'UTR       25456834 chr10:135038522-135038523(+) m6A 3'UTR       25456834 chr10:135038545-135038546(+) m6A 3'UTR       25456834 chr10:135038556-135038557(+) m6A 3'UTR       25456834 chr10:135038757-135038758(+) m6A 3'UTR       25456834 chr10:135038788-135038789(+) m6A 3'UTR       25456834 chr10:135039215-135039216(+) m6A 3'UTR       25456834 chr10:135039304-135039305(+) m6A 3'UTR       25456834 chr10:135039778-135039779(+) m6A 3'UTR       25456834 chr10:135039815-135039816(+) m6A 3'UTR       25456834

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	KNDC1	Endoplasmic reticulum Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: KNDC1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg