Basic Information:

  VIRBase ID:  

VHID00121880

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          SYDE1:  NM_033025     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	SYDE1
miRBase Accession/Entrez ID	MIMAT0014693	85360
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	7h3//SYD1

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	SYDE1	chr19:15218268-15218269(+) m6A CDS       24284625//24981863 chr19:15218297-15218298(+) m6A CDS       24284625//24981863 chr19:15218339-15218340(+) Gm intron       - chr19:15219659-15219660(+) m6A 5'UTR//intron       24284625//24981863 chr19:15219721-15219722(+) m6A 5'UTR//intron       24284625 chr19:15219726-15219727(+) m6A 5'UTR//intron       24284625 chr19:15219743-15219744(+) m6A 5'UTR//intron       24284625 chr19:15220055-15220056(+) m6A 5'UTR//CDS//intron       24284625//22575960 chr19:15220133-15220134(+) m6A 5'UTR//CDS       24284625 chr19:15220140-15220141(+) m6A 5'UTR//CDS       24284625 chr19:15220214-15220215(+) m6A 5'UTR//CDS//intron       24284625 chr19:15220489-15220490(+) m6A 5'UTR//intron       - chr19:15220608-15220609(+) m6A 5'UTR//CDS       24284625//24209618//24981863 chr19:15220703-15220704(+) m6A 5'UTR//CDS       24284625//24209618//24981863//22575960 chr19:15220784-15220785(+) m6A 5'UTR//CDS       24284625//24209618//22575960 chr19:15220946-15220947(+) m6A 5'UTR//CDS       24284625//25456834//24981863 chr19:15220990-15220991(+) m6A 5'UTR//CDS       24284625//25456834//24981863 chr19:15221015-15221016(+) m6A 5'UTR//CDS       24284625//25456834 chr19:15221030-15221031(+) m6A 5'UTR//CDS       24284625//25456834 chr19:15221093-15221094(+) m6A 5'UTR//CDS       22575960 chr19:15222131-15222132(+) m6A CDS       24284625 chr19:15222193-15222194(+) m6A CDS       24284625 chr19:15222220-15222221(+) m6A CDS       24284625 chr19:15222529-15222530(+) m6A CDS//intron       24284625 chr19:15222538-15222539(+) m6A CDS//intron       24284625 chr19:15223178-15223179(+) m6A CDS       24284625 chr19:15223232-15223233(+) m6A CDS       24284625 chr19:15223331-15223332(+) m6A CDS       24284625//22575960 chr19:15224454-15224455(+) m6A CDS       24284625 chr19:15224547-15224548(+) m6A CDS       24284625 chr19:15224586-15224587(+) m6A CDS       24284625//25456834//24981863//22575960 chr19:15224630-15224631(+) Gm CDS       - chr19:15224709-15224710(+) m6A CDS       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224792-15224793(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224808-15224809(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224858-15224859(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224905-15224906(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224927-15224928(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224960-15224961(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15224998-15224999(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr19:15225239-15225240(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:15225294-15225295(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:15225324-15225325(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr19:15225469-15225470(+) m6A 3'UTR       24284625 chr19:15225528-15225529(+) m6A 3'UTR       24284625 chr19:15225571-15225572(+) m6A 3'UTR       24284625 chr19:15225585-15225586(+) m6A 3'UTR       24284625 chr19:15225621-15225622(+) m6A 3'UTR       24284625//27773535

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	SYDE1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: SYDE1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg