Detail Information

Basic Information:


  VIRBase ID:  

VHID00121848

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:           ZBTB45:      

      *It may take a few minutes to display results.

Interactor Information:


Interactor1 Interactor2
Symbol hsv1-miR-H15 ZBTB45
miRBase
Accession/Entrez ID
MIMAT0014693 84878
Organism Human alphaherpesvirus 1 (HSV-1) Homo sapiens
Category miRNA mRNA
Alias - ZNF499

RNA Modification:


Resource Symbol ModificationPosition Type Genomic Context PMID
RMBase ZBTB45
chr19:59024903-59024904(-) m6A 3'UTR       25456834//24981863//22608085
chr19:59024924-59024925(-) m6A 3'UTR       25456834//24981863//22608085
chr19:59024943-59024944(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr19:59024973-59024974(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr19:59024983-59024984(-) m6A 3'UTR       24284625//25456834//24981863//22608085
chr19:59025135-59025136(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr19:59025156-59025157(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr19:59025172-59025173(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr19:59025177-59025178(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr19:59025190-59025191(-) m6A 3'UTR       24284625//24209618//25456834//24981863
chr19:59025230-59025231(-) m6A 3'UTR       24284625//25456834//24981863
chr19:59025327-59025328(-) m6A 3'UTR       24284625
chr19:59025348-59025349(-) m6A 3'UTR       24284625
chr19:59025612-59025613(-) m6A CDS       24284625//22575960
chr19:59025638-59025639(-) Tm CDS       -
chr19:59027790-59027791(-) m6A CDS       24284625//24981863//27773535//22575960
chr19:59028070-59028071(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//27773536
chr19:59028124-59028125(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:59028186-59028187(-) m6A CDS       24284625//24209618//25456834//24981863//27773535//27371828//22575960//22608085
chr19:59028324-59028325(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960//22608085
chr19:59028388-59028389(-) m6A CDS       24284625//25456834//24981863//27371828//22575960//22608085
chr19:59028703-59028704(-) m6A CDS       24284625//24209618//25456834//24981863//27371828
chr19:59028805-59028806(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//22575960
chr19:59028861-59028862(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr19:59028950-59028951(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22575960//22608085
chr19:59028976-59028977(-) m6A CDS       24284625//24209618//25456834//24981863//27371828//27773536//22608085
chr19:59028999-59029000(-) m6A CDS       24284625//25456834//24981863//27371828//27773536//22608085
chr19:59030407-59030408(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//27773536//22608085
chr19:59030437-59030438(-) m6A 5'UTR//intron       24284625//25456834//24981863//27371828//22608085
chr19:59030464-59030465(-) m6A 5'UTR//intron       24284625//25456834//24981863
chr19:59030537-59030538(-) m6A 5'UTR//intron       24284625//25456834//24981863
chr19:59030655-59030656(-) m6A 5'UTR//intron       24284625//25456834//24981863//22575960
chr19:59030746-59030747(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863//22575960
chr19:59030827-59030828(-) m6A 5'UTR//intron       24284625//24209618//25456834//24981863
chr19:59030988-59030989(-) m6A 5'UTR//intron       24284625//25456834
chr19:59031285-59031286(-) m6A 5'UTR//intron       24284625//24981863
chr19:59031356-59031357(-) m6A 5'UTR//intron       24284625//25456834
chr19:59031458-59031459(-) m6A 5'UTR//intron       24284625
chr19:59031482-59031483(-) m6A 5'UTR//intron       24284625
chr19:59031492-59031493(-) m6A 5'UTR//intron       24284625
chr19:59031558-59031559(-) m6A 5'UTR//intron       24284625
chr19:59031564-59031565(-) m6A 5'UTR//intron       24284625
chr19:59050096-59050097(-) m6A 5'UTR       24284625
chr19:59050107-59050108(-) m6A 5'UTR       24284625
chr19:59050117-59050118(-) m6A 5'UTR       24284625

RNA Localization:


Resource Symbol Subcellular Localization Tissue or Cell Line PMID
RNALocate ZBTB45
Chromatin K562 cells     -
Exosome Blood     -
Nucleoplasm K562 cells     -

Interaction Network (The top 100 interactions):


Interactor1: hsv1-miR-H15
Interactor2: ZBTB45

Evidence Support:


Prediction-Evidence cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database RepTar//VmiReg

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