Basic Information:

  VIRBase ID:  

VHID00121783

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          TRAF7:  NM_206835     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	TRAF7
miRBase Accession/Entrez ID	MIMAT0014693	84231
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CAFDADD//RFWD1//RNF119

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	TRAF7	chr16:2225007(+) A-I      intronic chr16:2212841(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	TRAF7	chr16:2213563-2213564(+) m6A 5'UTR//intron       24284625 chr16:2213899-2213900(+) m6A 5'UTR//exon       24284625//24981863 chr16:2215879-2215880(+) m6A CDS//exon       24284625//24981863 chr16:2215902-2215903(+) m6A CDS//exon       24284625//24981863 chr16:2218085-2218086(+) m6A 3'UTR//CDS//exon       24284625//24981863 chr16:2218112-2218113(+) m6A 3'UTR//CDS//exon       24284625//24981863//22575960 chr16:2218161-2218162(+) m6A 3'UTR//CDS//exon       24284625//24981863//22575960 chr16:2218233-2218234(+) m6A 3'UTR//intron       24284625 chr16:2218316-2218317(+) m6A 3'UTR//intron       25456834 chr16:2218355-2218356(+) m6A 3'UTR//intron       25456834 chr16:2221334-2221335(+) m6A 3'UTR//CDS//exon       24284625 chr16:2222253-2222254(+) Cm 3'UTR//CDS       - chr16:2222332-2222333(+) m6A 3'UTR//CDS       22575960 chr16:2222467-2222468(+) m6A 3'UTR//CDS       22575960 chr16:2223199-2223200(+) m6A CDS       22575960 chr16:2223205-2223206(+) m6A CDS       22575960 chr16:2223216-2223217(+) m6A CDS       22575960 chr16:2223228-2223229(+) m6A CDS       22575960 chr16:2223264-2223265(+) Cm CDS       - chr16:2225614-2225615(+) m6A CDS       22575960 chr16:2225841-2225842(+) m6A CDS       22575960 chr16:2225849-2225850(+) m6A CDS       22575960 chr16:2225943-2225944(+) m6A CDS       22575960 chr16:2226056-2226057(+) m6A CDS       22575960 chr16:2226082-2226083(+) m6A CDS       22575960 chr16:2226278-2226279(+) m6A CDS       24284625 chr16:2226298-2226299(+) m6A CDS       24284625 chr16:2226566-2226567(+) m6A CDS       24284625 chr16:2226607-2226608(+) m6A 3'UTR       24284625 chr16:2226618-2226619(+) m6A 3'UTR       24284625 chr16:2226687-2226688(+) m6A 3'UTR       24284625 chr16:2226885-2226886(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:2226933-2226934(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2226952-2226953(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2226965-2226966(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227053-2227054(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227061-2227062(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227227-2227228(+) m6A 3'UTR       24284625//24209618//24981863//22575960//22608085 chr16:2227289-2227290(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085 chr16:2227317-2227318(+) m6A 3'UTR       24284625//24209618//25456834//22608085 chr16:2227329-2227330(+) m6A 3'UTR       24284625//24209618//25456834//22608085 chr16:2227474-2227475(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:2227488-2227489(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:2227566-2227567(+) m6A 3'UTR       24284625//24209618//25456834//24981863//27773535//22575960//22608085 chr16:2227591-2227592(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227735-2227736(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227775-2227776(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr16:2227825-2227826(+) m6A 3'UTR       24284625//24209618//25456834//24981863//26404942//27371828//22575960//22608085 chr16:2227836-2227837(+) Am 3'UTR       - chr16:2227931-2227932(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227942-2227943(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22575960//22608085 chr16:2227979-2227980(+) m6A 3'UTR       24284625//24209618//25456834//24981863//22608085

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	TRAF7	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol K562 cells     - Exosome Blood     - Membrane K562 cells     - Nucleolus K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: TRAF7

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg