Basic Information:

  VIRBase ID:  

VHID00121639

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          GRHL2:  NM_001330593     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	GRHL2
miRBase Accession/Entrez ID	MIMAT0014693	79977
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	BOM//DFNA28//ECTDS//PPCD4//TFCP2L3

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	GRHL2	chr8:102675622(+) A-I      intronic chr8:102675630(+) A-I      intronic chr8:102594415(+) A-I      intronic chr8:102570123(+) A-I      intronic chr8:102606158(+) A-I      intronic chr8:102523715(+) A-I      intronic chr8:102606150(+) A-I      intronic chr8:102606307(+) A-I      intronic chr8:102513013(+) A-I      intronic chr8:102568399(+) A-I      intronic chr8:102624229(+) A-I      intronic chr8:102523705(+) A-I      intronic chr8:102605341(+) A-I      intronic chr8:102606093(+) A-I      intronic chr8:102594301(+) A-I      intronic chr8:102594313(+) A-I      intronic chr8:102658333(+) A-I      intronic chr8:102606108(+) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	GRHL2	chr8:102678988-102678989(+) m6A 3'UTR       25456834//24981863 chr8:102679008-102679009(+) m6A 3'UTR       25456834//24981863 chr8:102679016-102679017(+) m6A 3'UTR       25456834//24981863 chr8:102679051-102679052(+) m6A 3'UTR       25456834//24981863 chr8:102679076-102679077(+) m6A 3'UTR       25456834//24981863 chr8:102679222-102679223(+) m6A 3'UTR       25456834//24981863 chr8:102679253-102679254(+) m6A 3'UTR       25456834//24981863 chr8:102679281-102679282(+) m6A 3'UTR       25456834//24981863 chr8:102679294-102679295(+) m6A 3'UTR       25456834//24981863 chr8:102679357-102679358(+) m6A 3'UTR       25456834//24981863 chr8:102679427-102679428(+) m6A 3'UTR       25456834//24981863 chr8:102679644-102679645(+) m6A 3'UTR       25456834 chr8:102679650-102679651(+) m6A 3'UTR       25456834//24981863 chr8:102679658-102679659(+) m6A 3'UTR       25456834//24981863 chr8:102679700-102679701(+) m6A 3'UTR       25456834//24981863 chr8:102679763-102679764(+) m6A 3'UTR       25456834//24981863 chr8:102680064-102680065(+) m6A 3'UTR       25456834//24981863 chr8:102680092-102680093(+) m6A 3'UTR       25456834//24981863 chr8:102680150-102680151(+) m6A 3'UTR       25456834//24981863 chr8:102680292-102680293(+) m6A 3'UTR       24981863 chr8:102680310-102680311(+) m6A 3'UTR       24981863 chr8:102680367-102680368(+) m6A 3'UTR       25456834//24981863 chr8:102680379-102680380(+) m6A 3'UTR       25456834//24981863 chr8:102680397-102680398(+) m6A 3'UTR       25456834//24981863 chr8:102680428-102680429(+) m6A 3'UTR       24981863 chr8:102680856-102680857(+) m6A 3'UTR       25456834//24981863 chr8:102680871-102680872(+) m6A 3'UTR       25456834//24981863 chr8:102680909-102680910(+) m6A 3'UTR       25456834//24981863 chr8:102680980-102680981(+) m6A 3'UTR       25456834//24981863 chr8:102680993-102680994(+) m6A 3'UTR       25456834//24981863 chr8:102681016-102681017(+) m6A 3'UTR       25456834//24981863 chr8:102681029-102681030(+) m6A 3'UTR       25456834//24981863 chr8:102681048-102681049(+) m6A 3'UTR       25456834//24981863 chr8:102681109-102681110(+) m6A 3'UTR       25456834//24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	GRHL2	Exosome Blood     - Nucleus Colon cancer cells     24393600 Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: GRHL2

Evidence Support:

Prediction-Evidence	cRep//miRanda//Targetscan
Support Database	RepTar//VmiReg