Basic Information:

  VIRBase ID:  

VHID00121584

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2455

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          HECTD3:  NM_024602     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	HECTD3
miRBase Accession/Entrez ID	MIMAT0014693	79654
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	HECTD3	chr1:45468339-45468340(-) m6A 3'UTR//exon       24284625//27773535 chr1:45468346-45468347(-) m6A 3'UTR//exon       24284625//27773535 chr1:45468505-45468506(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr1:45468526-45468527(-) m6A 3'UTR//exon       24284625//24981863//27773535//22608085 chr1:45468686-45468687(-) m6A 3'UTR//exon       24284625//27773535 chr1:45468753-45468754(-) m6A 3'UTR//exon       24284625 chr1:45468760-45468761(-) m6A 3'UTR//exon       24284625 chr1:45468839-45468840(-) m6A 3'UTR//exon       24981863 chr1:45468974-45468975(-) m6A 3'UTR//exon       27773535 chr1:45469604-45469605(-) m6A CDS//exon       27773535//27773536 chr1:45469745-45469746(-) m6A CDS//exon       27773535//27773536//22575960 chr1:45469793-45469794(-) m6A CDS//exon       27773536//22575960 chr1:45469996-45469997(-) m6A CDS//exon       22575960 chr1:45470329-45470330(-) m6A CDS//exon       22575960 chr1:45470446-45470447(-) m6A CDS//exon       24209618 chr1:45470527-45470528(-) m6A exon//intron       24209618 chr1:45470533-45470534(-) m6A exon//intron       24209618 chr1:45472451-45472452(-) m6A CDS//exon       27773535 chr1:45475326-45475327(-) m6A CDS       27773535 chr1:45475692-45475693(-) Cm CDS       - chr1:45475916-45475917(-) m6A CDS       24284625 chr1:45475947-45475948(-) m6A CDS       24284625 chr1:45475958-45475959(-) m6A CDS       24284625 chr1:45476758-45476759(-) m6A CDS       27773536 chr1:45476768-45476769(-) m6A CDS       27773536 chr1:45476954-45476955(-) Y 5'UTR       26075521

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	HECTD3	Chromatin K562 cells     - Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: HECTD3

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid
Support Database	RepTar//VmiReg