Basic Information:

  VIRBase ID:  

VHID00121352

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          PLEKHG5:  NM_001265594     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	PLEKHG5
miRBase Accession/Entrez ID	MIMAT0014693	57449
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CMTRIC//DSMA4//GEF720//Syx//Tech

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	PLEKHG5	chr1:6542831(-) A-I      intronic chr1:6539768(-) A-I      intronic chr1:6540837(-) A-I      intronic chr1:6540761(-) A-I      intronic chr1:6563605(-) A-I      intronic chr1:6547285(-) A-I      intronic chr1:6539786(-) A-I      intronic chr1:6539946(-) A-I      intronic chr1:6547282(-) A-I      intronic chr1:6540338(-) A-I      intronic chr1:6543656(-) A-I      intronic chr1:6541802(-) A-I      intronic chr1:6539938(-) A-I      intronic chr1:6543600(-) A-I      intronic chr1:6542969(-) A-I      intronic chr1:6540957(-) A-I      intronic chr1:6540965(-) A-I      intronic chr1:6542865(-) A-I      intronic chr1:6539773(-) A-I      intronic chr1:6563596(-) A-I      intronic chr1:6539414(-) A-I      intronic chr1:6554603(-) A-I      intronic chr1:6579020(-) A-I      intronic chr1:6539842(-) A-I      intronic chr1:6543603(-) A-I      intronic chr1:6540904(-) A-I      intronic chr1:6539787(-) A-I      intronic chr1:6554042(-) A-I      intronic chr1:6540917(-) A-I      intronic chr1:6540847(-) A-I      intronic chr1:6542951(-) A-I      intronic chr1:6540889(-) A-I      intronic chr1:6541760(-) A-I      intronic chr1:6540332(-) A-I      intronic chr1:6540468(-) A-I      intronic chr1:6542987(-) A-I      intronic chr1:6540580(-) A-I      intronic chr1:6538977(-) A-I      intronic chr1:6540423(-) A-I      intronic chr1:6538501(-) A-I      intronic chr1:6540928(-) A-I      intronic chr1:6541812(-) A-I      intronic chr1:6542883(-) A-I      intronic chr1:6539618(-) A-I      intronic chr1:6539870(-) A-I      intronic chr1:6540811(-) A-I      intronic chr1:6539847(-) A-I      intronic chr1:6543711(-) A-I      intronic chr1:6542907(-) A-I      intronic chr1:6538078(-) A-I      intronic chr1:6538841(-) A-I      intronic chr1:6540801(-) A-I      intronic chr1:6542945(-) A-I      intronic chr1:6540344(-) A-I      intronic chr1:6540507(-) A-I      intronic chr1:6539826(-) A-I      intronic chr1:6539795(-) A-I      intronic chr1:6540626(-) A-I      intronic chr1:6538069(-) A-I      intronic chr1:6542897(-) A-I      intronic chr1:6539850(-) A-I      intronic chr1:6540503(-) A-I      intronic chr1:6540426(-) A-I      intronic chr1:6540581(-) A-I      intronic chr1:6538480(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	PLEKHG5	chr1:6526223-6526224(-) m6A 3'UTR//exon       27371828//27773536 chr1:6526322-6526323(-) m6A 3'UTR//exon       27773536 chr1:6527007-6527008(-) m6A 3'UTR//exon       25456834 chr1:6527021-6527022(-) m6A 3'UTR//exon       25456834 chr1:6527461-6527462(-) m6A 3'UTR//exon       24284625 chr1:6527577-6527578(-) m6A 3'UTR//exon       24284625 chr1:6527584-6527585(-) m6A 3'UTR//exon       24284625 chr1:6527918-6527919(-) m6A CDS//exon       27773536 chr1:6528019-6528020(-) m6A CDS//exon//intron       27773536 chr1:6528051-6528052(-) m6A CDS//exon//intron       27773536 chr1:6528149-6528150(-) m6A CDS//exon//intron       25456834 chr1:6528215-6528216(-) m6A CDS//exon//intron       24284625//25456834 chr1:6528409-6528410(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536 chr1:6528448-6528449(-) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//27371828//27773536 chr1:6528536-6528537(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536 chr1:6528592-6528593(-) m6A CDS//exon//intron       24284625//25456834//27371828//27773536 chr1:6528623-6528624(-) m6A CDS//exon//intron       24284625//25456834//24981863//27371828//27773536 chr1:6529173-6529174(-) m6A CDS//exon       24284625//25456834//24981863//27371828//27773536 chr1:6529413-6529414(-) m6A CDS//exon       24284625 chr1:6530302-6530303(-) m6A CDS//exon       27773536 chr1:6531845-6531846(-) m6A CDS//exon       27773536 chr1:6532604-6532605(-) m6A CDS//exon       27773536 chr1:6533076-6533077(-) m6A CDS//exon       24209618 chr1:6533100-6533101(-) m6A CDS//exon       24209618 chr1:6533491-6533492(-) m6A CDS//exon       27773536 chr1:6534079-6534080(-) m6A CDS//exon       27773536 chr1:6535143-6535144(-) m6A CDS//exon       27371828 chr1:6535151-6535152(-) m6A CDS//exon       27371828 chr1:6535530-6535531(-) m6A CDS//exon       24981863//27371828//27773536 chr1:6535557-6535558(-) m6A CDS//exon       24981863//27371828//27773536 chr1:6535579-6535580(-) m6A CDS//exon       24981863//27371828//27773536 chr1:6536032-6536033(-) m6A CDS//exon       27371828//27773536

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	PLEKHG5	Cytosol Human myelogenous leukemia cell line (K-562)     21613539 Cytosol HCC cell line (HepG2)|HeLa-S3 cells     - Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: PLEKHG5

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg