Basic Information:

  VIRBase ID:  

VHID00121348

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          JPH3:  NM_001271604     

      *It may take a few minutes to display results.

Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	JPH3
miRBase Accession/Entrez ID	MIMAT0014693	57338
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	CAGL237//HDL2//JP-3//JP3//TNRC22

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	JPH3	chr16:87667307(+) A-I      intronic chr16:87677637(+) A-I      intronic chr16:87706590(+) A-I      intronic chr16:87666360(+) A-I      intronic chr16:87707412(+) A-I      intronic chr16:87707411(+) A-I      intronic chr16:87706602(+) A-I      intronic chr16:87710193(+) A-I      intronic chr16:87646534(+) A-I      intronic chr16:87698055(+) A-I      intronic chr16:87652475(+) A-I      intronic chr16:87666410(+) A-I      intronic chr16:87673782(+) A-I      intronic chr16:87647201(+) A-I      intronic chr16:87677543(+) A-I      intronic chr16:87650719(+) A-I      intronic chr16:87706618(+) A-I      intronic chr16:87667169(+) A-I      intronic chr16:87642953(+) A-I      intronic chr16:87710305(+) A-I      intronic chr16:87647127(+) A-I      intronic chr16:87699929(+) A-I      intronic chr16:87692777(+) A-I      intronic chr16:87647056(+) A-I      intronic chr16:87647136(+) A-I      intronic chr16:87650811(+) A-I      intronic chr16:87674162(+) A-I      intronic chr16:87673874(+) A-I      intronic chr16:87693283(+) A-I      intronic chr16:87710949(+) A-I      intronic chr16:87650709(+) A-I      intronic chr16:87666528(+) A-I      intronic chr16:87666078(+) A-I      intronic chr16:87667179(+) A-I      intronic chr16:87677623(+) A-I      intronic chr16:87647026(+) A-I      intronic chr16:87645966(+) A-I      intronic chr16:87674182(+) A-I      intronic chr16:87652825(+) A-I      intronic chr16:87647027(+) A-I      intronic chr16:87693072(+) A-I      intronic chr16:87642536(+) A-I      intronic chr16:87667294(+) A-I      intronic chr16:87647189(+) A-I      intronic chr16:87698080(+) A-I      intronic chr16:87671848(+) A-I      intronic chr16:87674173(+) A-I      intronic chr16:87654715(+) A-I      intronic chr16:87698071(+) A-I      intronic chr16:87706493(+) A-I      intronic chr16:87652822(+) A-I      intronic chr16:87708630(+) A-I      intronic chr16:87650735(+) A-I      intronic chr16:87646996(+) A-I      intronic chr16:87677557(+) A-I      intronic chr16:87700051(+) A-I      intronic chr16:87706632(+) A-I      intronic chr16:87708431(+) A-I      intronic chr16:87646985(+) A-I      intronic chr16:87710295(+) A-I      intronic chr16:87696994(+) A-I      intronic chr16:87677593(+) A-I      intronic chr16:87710220(+) A-I      intronic chr16:87708466(+) A-I      intronic chr16:87707317(+) A-I      intronic chr16:87700110(+) A-I      intronic chr16:87708467(+) A-I      intronic chr16:87652681(+) A-I      intronic chr16:87693158(+) A-I      intronic chr16:87645847(+) A-I      intronic chr16:87643062(+) A-I      intronic chr16:87650710(+) A-I      intronic chr16:87677540(+) A-I      intronic chr16:87667175(+) A-I      intronic chr16:87710704(+) A-I      intronic chr16:87671655(+) A-I      intronic chr16:87646979(+) A-I      intronic chr16:87666402(+) A-I      intronic chr16:87643721(+) A-I      intronic chr16:87642973(+) A-I      intronic chr16:87707277(+) A-I      intronic chr16:87671706(+) A-I      intronic chr16:87696935(+) A-I      intronic chr16:87673814(+) A-I      intronic chr16:87697908(+) A-I      intronic chr16:87642593(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	JPH3	chr16:87691310(+) A-I intron -    19478186

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	JPH3	chr16:87635511-87635512(+) m6A exon       24209618//25456834 chr16:87636616-87636617(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834 chr16:87636738-87636739(+) m6A 5'UTR//exon//intron       24284625//24209618//25456834//24981863//22608085 chr16:87636809-87636810(+) Gm CDS//exon//intron       - chr16:87637079-87637080(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87637112-87637113(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22608085 chr16:87637118-87637119(+) m6A CDS//exon//intron       24284625//24209618//25456834//24981863//22608085 chr16:87637957-87637958(+) m6A exon//intron       24284625//24209618//24981863 chr16:87637992-87637993(+) m6A exon//intron       24284625//24209618//24981863 chr16:87638057-87638058(+) m6A exon//intron       24284625//24209618//24981863 chr16:87638064-87638065(+) m6A exon//intron       24284625//24209618//24981863 chr16:87677865-87677866(+) m6A CDS//exon       24284625//24209618//25456834//22608085 chr16:87678339-87678340(+) m6A CDS//exon       24284625//25456834//22608085 chr16:87678502-87678503(+) m6A CDS//exon       24284625//25456834 chr16:87678529-87678530(+) m6A CDS//exon       24284625//25456834 chr16:87678571-87678572(+) m6A CDS//exon       24284625//25456834 chr16:87687220-87687221(+) m6A exon//intron       24284625 chr16:87687228-87687229(+) m6A exon//intron       24284625 chr16:87687394-87687395(+) m6A exon//intron       24284625//25456834//22608085 chr16:87687418-87687419(+) m6A exon//intron       24284625//25456834 chr16:87687424-87687425(+) m6A exon//intron       24284625//25456834 chr16:87687445-87687446(+) m6A exon//intron       24284625//25456834 chr16:87687479-87687480(+) m6A exon//intron       24284625//25456834 chr16:87687637-87687638(+) m6A exon//intron       24284625 chr16:87687834-87687835(+) m6A exon//intron       24284625//25456834//22608085 chr16:87687859-87687860(+) m6A exon//intron       24284625//22608085 chr16:87687913-87687914(+) m6A exon//intron       24284625//25456834//22608085 chr16:87688053-87688054(+) m6A exon//intron       24284625//25456834 chr16:87688071-87688072(+) m6A exon//intron       24284625//25456834 chr16:87688094-87688095(+) m6A exon//intron       24284625//25456834 chr16:87688124-87688125(+) m6A exon//intron       24284625//25456834 chr16:87688184-87688185(+) m6A exon//intron       24284625//25456834 chr16:87688335-87688336(+) m6A exon//intron       24284625 chr16:87723280-87723281(+) m6A CDS//exon       24284625//24209618//25456834 chr16:87723316-87723317(+) m6A CDS//exon       24284625//24209618//25456834 chr16:87723452-87723453(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr16:87723506-87723507(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr16:87723539-87723540(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr16:87723668-87723669(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr16:87723718-87723719(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22608085 chr16:87723813-87723814(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87723905-87723906(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87723927-87723928(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87723947-87723948(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87723956-87723957(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87723996-87723997(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87724046-87724047(+) m6A CDS//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr16:87730311-87730312(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr16:87730331-87730332(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr16:87730348-87730349(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr16:87730360-87730361(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr16:87730395-87730396(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22608085 chr16:87730543-87730544(+) m6A 3'UTR//exon//intron       24284625 chr16:87731311-87731312(+) m6A 3'UTR//exon//intron       24284625 chr16:87731328-87731329(+) m6A 3'UTR//exon//intron       24284625 chr16:87731343-87731344(+) m6A 3'UTR//exon//intron       24284625 chr16:87731355-87731356(+) m6A 3'UTR//exon//intron       24284625 chr16:87731412-87731413(+) m6A 3'UTR//exon//intron       24284625 chr16:87731463-87731464(+) m6A 3'UTR//exon       24284625 chr16:87731471-87731472(+) m6A 3'UTR//exon       24284625 chr16:87731562-87731563(+) m6A 3'UTR//exon       24284625 chr16:87731631-87731632(+) m6A 3'UTR//exon       24284625 chr16:87731684-87731685(+) m6A 3'UTR//exon       24284625

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	JPH3	Chromatin K562 cells     - Exosome Blood     - Nucleoplasm K562 cells     - Nucleus HeLa-S3 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: JPH3

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg