Basic Information:

  VIRBase ID:  

VHID00121333

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          RNPEPL1:  NM_018226     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	RNPEPL1
miRBase Accession/Entrez ID	MIMAT0014693	57140
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	-

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	RNPEPL1	chr2:241508421-241508422(+) m6A 5'UTR//exon//intron       24209618 chr2:241517049-241517050(+) m6A CDS//exon       24284625 chr2:241517220-241517221(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:241517226-241517227(+) m6A CDS//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:241517341-241517342(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:241517467-241517468(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:241517488-241517489(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:241517496-241517497(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//22575960//22608085 chr2:241517804-241517805(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:241517810-241517811(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:241517816-241517817(+) m6A 3'UTR//exon       24284625//24209618//25456834//24981863//26404942//22575960//22608085 chr2:241517843-241517844(+) m6A 3'UTR//exon       24284625//25456834//24981863//26404942//22575960//22608085 chr2:241517909-241517910(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960 chr2:241517924-241517925(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960 chr2:241517943-241517944(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960 chr2:241517948-241517949(+) m6A 3'UTR//exon       24284625//25456834//24981863//22575960 chr2:241518090-241518091(+) m6A 3'UTR//exon       -

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	RNPEPL1	Chromatin K562 cells     - Cytosol HCC cell line (HepG2)|K562 cells     - Exosome Blood     - Nucleolus K562 cells     - Nucleoplasm K562 cells     - Nucleus HCC cell line (HepG2)|HeLa-S3 cells|K562 cells     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: RNPEPL1

Evidence Support:

Prediction-Evidence	cRep//miRanda//Rep//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg