Basic Information:

  VIRBase ID:  

VHID00121279

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2483

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          AJAP1:  NM_018836     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	AJAP1
miRBase Accession/Entrez ID	MIMAT0014693	55966
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	MOT8//SHREW-1//SHREW1

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	AJAP1	chr1:4799256(+) A-I      intronic chr1:4799249(+) A-I      intronic chr1:4799288(+) A-I      intronic chr1:4799276(+) A-I      intronic chr1:4799246(+) A-I      intronic chr1:4840096(+) A-I      intronic chr1:4840083(+) A-I      intronic chr1:4808727(+) A-I      intronic chr1:4840093(+) A-I      intronic chr1:4840084(+) A-I      intronic chr1:4775625(+) A-I      intronic chr1:4748852(+) A-I      intronic chr1:4840132(+) A-I      intronic chr1:4840796(+) A-I      intronic chr1:4718597(+) A-I      intronic chr1:4840831(+) A-I      intronic chr1:4840129(+) A-I      intronic chr1:4840821(+) A-I      intronic chr1:4840854(+) A-I      intronic chr1:4840089(+) A-I      intronic chr1:4840792(+) A-I      intronic chr1:4840810(+) A-I      intronic chr1:4840125(+) A-I      intronic chr1:4840027(+) A-I      intronic chr1:4796941(+) A-I      intronic chr1:4840029(+) A-I      intronic chr1:4840058(+) A-I      intronic chr1:4840081(+) A-I      intronic chr1:4840124(+) A-I      intronic chr1:4797223(+) A-I      intronic chr1:4775666(+) A-I      intronic chr1:4840043(+) A-I      intronic

Resource	Symbol	Editing Position	Change	SeqReg	exReg	PMID
DARNED	AJAP1	chr1:4839048(+) A-I intron -    15342557 chr1:4839652(+) A-I intron -    15342557 chr1:4840029(+) A-I intron -    15342557 chr1:4840043(+) A-I intron -    15342557 chr1:4840058(+) A-I intron -    15342557 chr1:4840081(+) A-I intron -    15342557 chr1:4840083(+) A-I intron -    15342557 chr1:4840084(+) A-I intron -    15342557 chr1:4840089(+) A-I intron -    15342557 chr1:4840093(+) A-I intron -    15342557 chr1:4840124(+) A-I intron -    15342557 chr1:4840125(+) A-I intron -    15342557 chr1:4840129(+) A-I intron -    15342557

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	AJAP1	chr1:4772136-4772137(+) m6A CDS//exon       25456834 chr1:4772246-4772247(+) m6A CDS       25456834 chr1:4772277-4772278(+) m6A CDS       25456834 chr1:4772461-4772462(+) m6A CDS       25456834 chr1:4772560-4772561(+) m6A CDS       25456834 chr1:4772569-4772570(+) m6A CDS       25456834 chr1:4842618-4842619(+) m6A 3'UTR       25456834//24981863 chr1:4842628-4842629(+) m6A 3'UTR       25456834//24981863 chr1:4842633-4842634(+) m6A 3'UTR       25456834//24981863 chr1:4842642-4842643(+) m6A 3'UTR       25456834//24981863 chr1:4842647-4842648(+) m6A 3'UTR       25456834//24981863 chr1:4842656-4842657(+) m6A 3'UTR       25456834//24981863 chr1:4842661-4842662(+) m6A 3'UTR       25456834//24981863 chr1:4842668-4842669(+) m6A 3'UTR       25456834//24981863 chr1:4842726-4842727(+) m6A 3'UTR       25456834//24981863 chr1:4842819-4842820(+) m6A 3'UTR       25456834//24981863 chr1:4842845-4842846(+) m6A 3'UTR       25456834//24981863 chr1:4842901-4842902(+) m6A 3'UTR       24981863 chr1:4842927-4842928(+) m6A 3'UTR       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	AJAP1	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: AJAP1

Evidence Support:

Prediction-Evidence	cRep//miRanda//PITA//RNAHybrid//Targetscan
Support Database	RepTar//VmiReg