Basic Information:

  VIRBase ID:  

VHID00120641

  Virus:  

Human alphaherpesvirus 1 (HSV-1)

  Host:  

Homo sapiens

  Confidence Score:  

0.2381

  Interaction Type:  

Virus-Host interaction

  Predicted Binding:

 

      hsv1-miR-H15:  MIMAT0014693          ITGA11:  NM_001004439     

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Interactor Information:

	Interactor1	Interactor2
Symbol	hsv1-miR-H15	ITGA11
miRBase Accession/Entrez ID	MIMAT0014693	22801
Organism	Human alphaherpesvirus 1 (HSV-1)	Homo sapiens
Category	miRNA	mRNA
Alias	-	HsT18964

RNA Editing:

Resource	Symbol	Editing Position	Change	Genetic Region
RADAR	ITGA11	chr15:68709133(-) A-I      intronic chr15:68709129(-) A-I      intronic chr15:68709120(-) A-I      intronic chr15:68709160(-) A-I      intronic chr15:68602043(-) A-I      intronic chr15:68602018(-) A-I      intronic chr15:68651875(-) A-I      intronic chr15:68644637(-) A-I      intronic chr15:68600188(-) A-I      intronic chr15:68644659(-) A-I      intronic chr15:68598360(-) A-I      intronic

RNA Modification:

Resource	Symbol	ModificationPosition	Type	Genomic Context	PMID
RMBase	ITGA11	chr15:68594201-68594202(-) m6A 3'UTR       24981863 chr15:68594234-68594235(-) m6A 3'UTR       24981863 chr15:68594289-68594290(-) m6A 3'UTR       24981863 chr15:68594533-68594534(-) m6A 3'UTR       24981863 chr15:68594761-68594762(-) m6A 3'UTR       24981863 chr15:68594782-68594783(-) m6A 3'UTR       24981863 chr15:68594798-68594799(-) m6A 3'UTR       24981863 chr15:68594850-68594851(-) m6A 3'UTR       24981863 chr15:68594960-68594961(-) m6A 3'UTR       24981863 chr15:68594965-68594966(-) m6A 3'UTR       24981863 chr15:68595010-68595011(-) m6A 3'UTR       24981863 chr15:68595023-68595024(-) m6A 3'UTR       24981863 chr15:68595037-68595038(-) m6A 3'UTR       24981863 chr15:68595154-68595155(-) m6A 3'UTR       24981863 chr15:68595174-68595175(-) m6A 3'UTR       24981863 chr15:68595189-68595190(-) m6A 3'UTR       24981863 chr15:68595195-68595196(-) m6A 3'UTR       24981863 chr15:68595211-68595212(-) m6A 3'UTR       24981863 chr15:68595233-68595234(-) m6A 3'UTR       24981863 chr15:68595336-68595337(-) m6A 3'UTR       24981863 chr15:68595359-68595360(-) m6A 3'UTR       24981863 chr15:68595382-68595383(-) m6A 3'UTR       24981863 chr15:68595421-68595422(-) m6A CDS       24981863

RNA Localization:

Resource	Symbol	Subcellular Localization	Tissue or Cell Line	PMID
RNALocate	ITGA11	Exosome Blood     -

Interaction Network (The top 100 interactions):

Interactor1: hsv1-miR-H15
Interactor2: ITGA11

Evidence Support:

Prediction-Evidence	cRep//miRanda//RNAHybrid
Support Database	RepTar//VmiReg